RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MFSD6Q6ZSS7 791 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
TRIM39-209ENST00000428728 ASB14A6NK59 587 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 ICAM1P05362 532 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 ASGR1P07306 291 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 RAG1P15918 1043 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
TRIM39-209ENST00000428728 PCSK9Q8NBP7 692 aaKnown RBP20.12■□□□□ 0.81
TRIM39-209ENST00000428728 VTI1AQ96AJ9 217 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 GLT1D1Q96MS3 346 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 RANBP17Q9H2T7 1088 aaKnown RBP20.12■□□□□ 0.81
TRIM39-209ENST00000428728 DIAPH3Q9NSV4 1193 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 TCP11L1Q9NUJ3 509 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 TMEM39AQ9NV64 488 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 CYP39A1Q9NYL5 469 aa20.12■□□□□ 0.81
TRIM39-209ENST00000428728 DCDC2CA8MYV0 355 aa20.11■□□□□ 0.81
TRIM39-209ENST00000428728 PDHBP11177 359 aa20.11■□□□□ 0.81
TRIM39-209ENST00000428728 GJA9P57773 515 aa20.11■□□□□ 0.81
TRIM39-209ENST00000428728 TNFAIP2Q03169 654 aa20.11■□□□□ 0.81
TRIM39-209ENST00000428728 CWC27Q6UX04 472 aaKnown RBP20.11■□□□□ 0.81
TRIM39-209ENST00000428728 FBXO16Q8IX29 292 aaPredicted RBP20.11■□□□□ 0.81
TRIM39-209ENST00000428728 FAM161BQ96MY7 647 aa20.11■□□□□ 0.81
TRIM39-209ENST00000428728 OSBPL3Q9H4L5 887 aa20.11■□□□□ 0.81
TRIM39-209ENST00000428728 KIAA0355O15063 1070 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 PTGS1P23219 599 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 BEX3Q00994 111 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 FAAP100Q0VG06 881 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 GNASQ5JWF2 1037 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 BTNL9Q6UXG8 535 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 EEPD1Q7L9B9 569 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 ANKRD33Q7Z3H0 272 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 PURBQ96QR8 312 aaKnown RBP20.1■□□□□ 0.81
TRIM39-209ENST00000428728 ZKSCAN3Q9BRR0 538 aa20.1■□□□□ 0.81
TRIM39-209ENST00000428728 RNF41Q9H4P4 317 aaPredicted RBP20.1■□□□□ 0.81
TRIM39-209ENST00000428728 COL6A3P12111 3177 aa20.09■□□□□ 0.81
TRIM39-209ENST00000428728 NFIBO00712 420 aa20.09■□□□□ 0.81
TRIM39-209ENST00000428728 PCP11498 1178 aaKnown RBP20.09■□□□□ 0.81
TRIM39-209ENST00000428728 TLK2Q86UE8 772 aa20.09■□□□□ 0.81
TRIM39-209ENST00000428728 SLC17A8Q8NDX2 589 aa20.09■□□□□ 0.81
TRIM39-209ENST00000428728 ELP1O95163 1332 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 MROH7Q68CQ1 1323 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 A0A0U1RQG5 324 aaPredicted RBP20.08■□□□□ 0.81
TRIM39-209ENST00000428728 CTAGE5O15320 804 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 EPHB4P54760 987 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 FPGSQ05932 587 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 ZNF543Q08ER8 600 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 ESR2Q92731 530 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 TOX2Q96NM4 488 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 PDGFCQ9NRA1 345 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 STXBP5LQ9Y2K9 1186 aa20.08■□□□□ 0.81
TRIM39-209ENST00000428728 PTPDC1A2A3K4 754 aa20.07■□□□□ 0.8
TRIM39-209ENST00000428728 ZNF213O14771 459 aa20.07■□□□□ 0.8
TRIM39-209ENST00000428728 BAATQ14032 418 aaPredicted RBP20.07■□□□□ 0.8
TRIM39-209ENST00000428728 ZNF697Q5TEC3 545 aa20.07■□□□□ 0.8
TRIM39-209ENST00000428728 SLC30A10Q6XR72 485 aa20.07■□□□□ 0.8
TRIM39-209ENST00000428728 RNPC3Q96LT9 517 aaKnown RBP20.07■□□□□ 0.8
TRIM39-209ENST00000428728 AP5M1Q9H0R1 490 aa20.07■□□□□ 0.8
TRIM39-209ENST00000428728 GBF1Q92538 1859 aa20.07■□□□□ 0.8
TRIM39-209ENST00000428728 SMPD1P17405 629 aa20.06■□□□□ 0.8
TRIM39-209ENST00000428728 ALDH5A1P51649 535 aaPredicted RBP20.06■□□□□ 0.8
TRIM39-209ENST00000428728 FAM109BQ6ICB4 259 aaPredicted RBP20.06■□□□□ 0.8
TRIM39-209ENST00000428728 CXCL17Q6UXB2 119 aa20.06■□□□□ 0.8
TRIM39-209ENST00000428728 TTC14Q96N46 770 aa20.06■□□□□ 0.8
TRIM39-209ENST00000428728 GUCD1Q96NT3 240 aa20.06■□□□□ 0.8
TRIM39-209ENST00000428728 TBX21Q9UL17 535 aa20.06■□□□□ 0.8
TRIM39-209ENST00000428728 GNEQ9Y223 722 aaKnown RBP20.06■□□□□ 0.8
TRIM39-209ENST00000428728 KIAA1217Q5T5P2 1943 aa20.06■□□□□ 0.8
TRIM39-209ENST00000428728 B4E1Z4 1266 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 ARVCFO00192 962 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 HIP1O00291 1037 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 KDM4AO75164 1064 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 GOLGA8HP0CJ92 632 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 SNHG28P0DPA3 235 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 CALML3P27482 149 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 FSCN1Q16658 493 aaKnown RBP20.05■□□□□ 0.8
TRIM39-209ENST00000428728 TMEM63BQ5T3F8 832 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 TAPT1Q6NXT6 567 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 CPVLQ9H3G5 476 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 VTA1Q9NP79 307 aa20.05■□□□□ 0.8
TRIM39-209ENST00000428728 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
TRIM39-209ENST00000428728 DYNC1LI2O43237 492 aaPredicted RBP20.04■□□□□ 0.8
TRIM39-209ENST00000428728 CDK7P50613 346 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 USH1GQ495M9 461 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 KIAA1211Q6ZU35 1233 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 IQCA1Q86XH1 822 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 FAM126BQ8IXS8 530 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 CLEC4DQ8WXI8 215 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 PPP1R12CQ9BZL4 782 aa20.04■□□□□ 0.8
TRIM39-209ENST00000428728 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
TRIM39-209ENST00000428728 LAMA2P24043 3122 aaKnown RBP20.04■□□□□ 0.8
TRIM39-209ENST00000428728 TLR3O15455 904 aaKnown RBP20.03■□□□□ 0.8
TRIM39-209ENST00000428728 TIMP1P01033 207 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 NKX3-2P78367 333 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 GPATCH4Q5T3I0 446 aaKnown RBP20.03■□□□□ 0.8
TRIM39-209ENST00000428728 IQSEC1Q6DN90 963 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 RNF207Q6ZRF8 634 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 PNMA1Q8ND90 353 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 MORC4Q8TE76 937 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 DSCC1Q9BVC3 393 aa20.03■□□□□ 0.8
TRIM39-209ENST00000428728 WDR19Q8NEZ3 1342 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms