RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 V9GY48 417 aaPredicted RBP16.87■□□□□ 0.29
SGCE-204ENST00000428696 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 CPLX1O14810 134 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 TKFCQ3LXA3 575 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 MORN1Q5T089 497 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 FBXL16Q8N461 479 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 AGXT2Q9BYV1 514 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
SGCE-204ENST00000428696 RIOX1Q9H6W3 641 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 SLC5A4Q9NY91 659 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 PNMA2Q9UL42 364 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
SGCE-204ENST00000428696 RLFQ13129 1914 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 CALML3P27482 149 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 GRK4P32298 578 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 AKAP17AQ02040 695 aaKnown RBP16.86■□□□□ 0.29
SGCE-204ENST00000428696 GRB14Q14449 540 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 ZNF274Q96GC6 653 aaPredicted RBP16.86■□□□□ 0.29
SGCE-204ENST00000428696 TBC1D32Q96NH3 1257 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 SPZ1Q9BXG8 430 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
SGCE-204ENST00000428696 POTEB2H3BUK9 544 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 NFIBO00712 420 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 COBLO75128 1261 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 CCL14Q16627 93 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 HEATR3Q7Z4Q2 680 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 NECAB1Q8N987 351 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 KIF2CQ99661 725 aa16.85■□□□□ 0.29
SGCE-204ENST00000428696 FAM217BQ9NTX9 383 aaPredicted RBP16.85■□□□□ 0.29
SGCE-204ENST00000428696 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
SGCE-204ENST00000428696 ABCB11O95342 1321 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 PPP1R11O60927 126 aaPredicted RBP16.84■□□□□ 0.29
SGCE-204ENST00000428696 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 TRAF1Q13077 416 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 BAATQ14032 418 aaPredicted RBP16.84■□□□□ 0.29
SGCE-204ENST00000428696 PPP2R5BQ15173 497 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 RABEP1Q15276 862 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
SGCE-204ENST00000428696 ABRAQ8N0Z2 381 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 NPLOC4Q8TAT6 608 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 PHKBQ93100 1093 aa16.84■□□□□ 0.29
SGCE-204ENST00000428696 ALDH8A1Q9H2A2 487 aaPredicted RBP16.84■□□□□ 0.29
SGCE-204ENST00000428696 COL11A1P12107 1806 aaPredicted RBP16.83■□□□□ 0.29
SGCE-204ENST00000428696 DTNBO60941 627 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 CFBP00751 764 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 RCAN1P53805 252 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 IRF5Q13568 498 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 SLAIN1Q8ND83 568 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 IL17RAQ96F46 866 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 APBA2Q99767 749 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
SGCE-204ENST00000428696 A1CFQ9NQ94 594 aaKnown RBP16.83■□□□□ 0.28
SGCE-204ENST00000428696 CCDC85CA6NKD9 419 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 ST18O60284 1047 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 EVCP57679 992 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
SGCE-204ENST00000428696 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 MCF2L2Q86YR7 1114 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 CLEC4DQ8WXI8 215 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 TBC1D5Q92609 795 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 USP6NLQ92738 828 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 MTMR8Q96EF0 704 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 PURBQ96QR8 312 aaKnown RBP16.82■□□□□ 0.28
SGCE-204ENST00000428696 CYP39A1Q9NYL5 469 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 LIMCH1Q9UPQ0 1083 aa16.82■□□□□ 0.28
SGCE-204ENST00000428696 PFASO15067 1338 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 XRCC5P13010 732 aaKnown RBP16.81■□□□□ 0.28
SGCE-204ENST00000428696 CYP2C19P33261 490 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 TRIM22Q8IYM9 498 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 TRIB2Q92519 343 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 GPKOWQ92917 476 aaPredicted RBP eCLIP16.81■□□□□ 0.28
SGCE-204ENST00000428696 ABHD8Q96I13 439 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 FLRT1Q9NZU1 646 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
SGCE-204ENST00000428696 PARP14Q460N5 1801 aa16.81■□□□□ 0.28
SGCE-204ENST00000428696 INHAP05111 366 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 CNGA1P29973 690 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
SGCE-204ENST00000428696 UBXN2AP68543 259 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 SCRN1Q12765 414 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 TRIM32Q13049 653 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 ME3Q16798 604 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 SLC30A10Q6XR72 485 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 FCHSD1Q86WN1 690 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 TRMT44Q8IYL2 757 aaKnown RBP16.8■□□□□ 0.28
SGCE-204ENST00000428696 MAML3Q96JK9 1138 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 A0A0G2JMZ2 1700 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 CNTNAP5Q8WYK1 1306 aa16.8■□□□□ 0.28
SGCE-204ENST00000428696 PFKFB2O60825 505 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 LARGE1O95461 756 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 HMGCRP04035 888 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 NAPAP54920 295 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
SGCE-204ENST00000428696 ZNF792Q3KQV3 632 aa16.79■□□□□ 0.28
SGCE-204ENST00000428696 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms