RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 LDLRAD1Q5T700 205 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 RESP18Q5W5W9 173 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
NR1I3-209ENST00000428574 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 ZKSCAN4Q969J2 545 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-209ENST00000428574 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-209ENST00000428574 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-209ENST00000428574 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 SLC38A10Q9HBR0 1119 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 PCDHB6Q9Y5E3 794 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
NR1I3-209ENST00000428574 TCHHQ07283 1943 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 SLC26A4O43511 780 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 KINO60870 393 aaKnown RBP10.33□□□□□ -0.76
NR1I3-209ENST00000428574 HOXA7P31268 230 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-209ENST00000428574 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-209ENST00000428574 ZSCAN23Q3MJ62 389 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 LBX2Q6XYB7 198 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 MCF2L2Q86YR7 1114 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 COA7Q96BR5 231 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 AK8Q96MA6 479 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-209ENST00000428574 CLSTN2Q9H4D0 955 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 HOXC10Q9NYD6 342 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 FBXO2Q9UK22 296 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-209ENST00000428574 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 OTOFQ9HC10 1997 aa10.33□□□□□ -0.76
NR1I3-209ENST00000428574 CYP3A7-CYP3A51PA0A087WV96 503 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 ZBED4O75132 1171 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 FLOT1O75955 427 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 CAVIN2O95810 425 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 CYP3A7P24462 503 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 SREBF1P36956 1147 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 CEBPZQ03701 1054 aaKnown RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 PABPC4Q13310 644 aaKnown RBP eCLIP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 COG2Q14746 738 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 EAPPQ56P03 285 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 EARS2Q5JPH6 523 aaKnown RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 CCAR1Q8IX12 1150 aaKnown RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 FMR1NBQ8N0W7 255 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 GTF3C2Q8WUA4 911 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 MBOAT7Q96N66 472 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 RPAP3Q9H6T3 665 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
NR1I3-209ENST00000428574 SCAF8Q9UPN6 1271 aaKnown RBP10.32□□□□□ -0.76
NR1I3-209ENST00000428574 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 SPDYE3A6NKU9 549 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 VWA5AO00534 786 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 MEIS2O14770 477 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 TBX3O15119 743 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 NEMFO60524 1076 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 CYP3A4P08684 503 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 LIG1P18858 919 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 CIITAP33076 1130 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 COPB2P35606 906 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 HSD17B4P51659 736 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 HMGCS2P54868 508 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 PTGDRQ13258 359 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 SEMA3FQ13275 785 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 SNW1Q13573 536 aaKnown RBP10.31□□□□□ -0.76
NR1I3-209ENST00000428574 ZYXQ15942 572 aaKnown RBP10.31□□□□□ -0.76
NR1I3-209ENST00000428574 INF2Q27J81 1249 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 PRAMEF18Q5VWM3 479 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 CATSPERGQ6ZRH7 1159 aa10.31□□□□□ -0.76
NR1I3-209ENST00000428574 FASTKD5Q7L8L6 764 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms