RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 NEK1Q96PY6 1258 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 VAT1LQ9HCJ6 419 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 PNMA2Q9UL42 364 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 ASTN1O14525 1302 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 PFASO15067 1338 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 SYNGAP1Q96PV0 1343 aa19.47■□□□□ 0.71
VRK2-204ENST00000428021 ZNF865P0CJ78 1059 aaPredicted RBP19.46■□□□□ 0.71
VRK2-204ENST00000428021 NSMFQ6X4W1 530 aa19.46■□□□□ 0.71
VRK2-204ENST00000428021 CATIPQ7Z7H3 387 aa19.46■□□□□ 0.71
VRK2-204ENST00000428021 PAWRQ96IZ0 340 aaKnown RBP19.46■□□□□ 0.71
VRK2-204ENST00000428021 LRRC2Q9BYS8 371 aa19.46■□□□□ 0.71
VRK2-204ENST00000428021 BAZ2BQ9UIF8 2168 aaKnown RBP19.46■□□□□ 0.71
VRK2-204ENST00000428021 MYH6P13533 1939 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 MSCO60682 206 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 HSPA4P34932 840 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 LIFRP42702 1097 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 EXOSC10Q01780 885 aaKnown RBP19.45■□□□□ 0.7
VRK2-204ENST00000428021 BAATQ14032 418 aaPredicted RBP19.45■□□□□ 0.7
VRK2-204ENST00000428021 QRICH1Q2TAL8 776 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 ANO1Q5XXA6 986 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 ZNF654Q8IZM8 581 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 PURBQ96QR8 312 aaKnown RBP19.45■□□□□ 0.7
VRK2-204ENST00000428021 MYL10Q9BUA6 226 aa19.45■□□□□ 0.7
VRK2-204ENST00000428021 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.45■□□□□ 0.7
VRK2-204ENST00000428021 CYTH3O43739 400 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 REC8O95072 547 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 USH1GQ495M9 461 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 ARMCX2Q7L311 632 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 CCDC144CPQ8IYA2 1237 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 RIOX1Q9H6W3 641 aa19.44■□□□□ 0.7
VRK2-204ENST00000428021 DHX16O60231 1041 aaKnown RBP19.43■□□□□ 0.7
VRK2-204ENST00000428021 PPP1R11O60927 126 aaPredicted RBP19.43■□□□□ 0.7
VRK2-204ENST00000428021 DDAH1O94760 285 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 KRT32Q14532 448 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 DHX32Q7L7V1 743 aaKnown RBP19.43■□□□□ 0.7
VRK2-204ENST00000428021 NECAB2Q7Z6G3 386 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 NUP133Q8WUM0 1156 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 KATNBL1Q9H079 304 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 CNPY2Q9Y2B0 182 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 SNX14Q9Y5W7 946 aa19.43■□□□□ 0.7
VRK2-204ENST00000428021 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
VRK2-204ENST00000428021 COL6A1P12109 1028 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 ACVR2BQ13705 512 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 SLC30A10Q6XR72 485 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 SGMS1Q86VZ5 419 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 FBXO11Q86XK2 927 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 RGS22Q8NE09 1264 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 TCEANC2Q96MN5 208 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 ABCB11O95342 1321 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 DNAH12Q6ZR08 3092 aa19.42■□□□□ 0.7
VRK2-204ENST00000428021 PTPDC1A2A3K4 754 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 CCDC69A6NI79 296 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 ZBTB5O15062 677 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 EPB41L2O43491 1005 aaKnown RBP19.41■□□□□ 0.7
VRK2-204ENST00000428021 RPS6P62753 249 aaKnown RBP19.41■□□□□ 0.7
VRK2-204ENST00000428021 NFXL1Q6ZNB6 911 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 RNF207Q6ZRF8 634 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 MORC4Q8TE76 937 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 TBC1D5Q92609 795 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 PIGSQ96S52 555 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 USP26Q9BXU7 913 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 ABHD16BQ9H3Z7 469 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 ALPK3Q96L96 1907 aa19.41■□□□□ 0.7
VRK2-204ENST00000428021 ASB14A6NK59 587 aa19.4■□□□□ 0.7
VRK2-204ENST00000428021 AKR1A1P14550 325 aa19.4■□□□□ 0.7
VRK2-204ENST00000428021 RXRAP19793 462 aa19.4■□□□□ 0.7
VRK2-204ENST00000428021 LENG1Q96BZ8 264 aaPredicted RBP19.4■□□□□ 0.7
VRK2-204ENST00000428021 HTATIP2Q9BUP3 242 aa19.4■□□□□ 0.7
VRK2-204ENST00000428021 AMNQ9BXJ7 453 aa19.4■□□□□ 0.7
VRK2-204ENST00000428021 C11orf49Q9H6J7 331 aa19.4■□□□□ 0.7
VRK2-204ENST00000428021 ZHX1Q9UKY1 873 aaPredicted RBP19.4■□□□□ 0.7
VRK2-204ENST00000428021 LRRC37A2A6NM11 1700 aa19.39■□□□□ 0.7
VRK2-204ENST00000428021 OPLAHO14841 1288 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 ADCY6O43306 1168 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 CPA1P15085 419 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 CALML3P27482 149 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.69
VRK2-204ENST00000428021 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 RAB11FIP4Q86YS3 637 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 CTCFLQ8NI51 663 aaPredicted RBP19.39■□□□□ 0.69
VRK2-204ENST00000428021 MAF1Q9H063 256 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 FAM184BQ9ULE4 1060 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 MRPL11Q9Y3B7 192 aaKnown RBP19.39■□□□□ 0.69
VRK2-204ENST00000428021 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
VRK2-204ENST00000428021 DNM1LO00429 736 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 PLEKHA8P1O95397 391 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
VRK2-204ENST00000428021 RARBP10826 455 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 SMARCA1P28370 1054 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 KIF5BP33176 963 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 CCDC144BQ3MJ40 725 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 GJC2Q5T442 439 aaPredicted RBP19.38■□□□□ 0.69
VRK2-204ENST00000428021 SRBD1Q8N5C6 995 aaKnown RBP19.38■□□□□ 0.69
VRK2-204ENST00000428021 ARRDC4Q8NCT1 418 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 JAKMIP1Q96N16 626 aaKnown RBP19.38■□□□□ 0.69
VRK2-204ENST00000428021 SPZ1Q9BXG8 430 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 XPNPEP3Q9NQH7 507 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms