RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ASB14A6NK59 587 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 B4DLN1 442 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 TNRC18O15417 2968 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-203ENST00000428014 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-203ENST00000428014 REC8O95072 547 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 CALM1P0DP23 149 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 CALM2P0DP24 149 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 CALM3P0DP25 149 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 COL6A1P12109 1028 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 MCM5P33992 734 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 MRPL12P52815 198 aaKnown RBP10.68□□□□□ -0.7
SMC1A-203ENST00000428014 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 TROAPQ12815 778 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 WDR78Q5VTH9 848 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 NECAB2Q7Z6G3 386 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 SGMS1Q86VZ5 419 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 MB21D2Q8IYB1 491 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-203ENST00000428014 STK11IPQ8N1F8 1099 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 DNERQ8NFT8 737 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 DEFB118Q96PH6 123 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 LZTS2Q9BRK4 669 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 Q9Y3F1 56 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 CEP290O15078 2479 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 PLXNA1Q9UIW2 1896 aa10.68□□□□□ -0.7
SMC1A-203ENST00000428014 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 DNM1LO00429 736 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 RAD21O60216 631 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 DDAH1O94760 285 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 PARP1P09874 1014 aaKnown RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 AKR1A1P14550 325 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 GNAQP50148 359 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 CCL14Q16627 93 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 CCDC96Q2M329 555 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 KCTD1Q719H9 257 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 ANKRD35Q8N283 1001 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 IGDCC4Q8TDY8 1250 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 MPHOSPH6Q99547 160 aaKnown RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 A1CFQ9NQ94 594 aaKnown RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 RNF146Q9NTX7 359 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
SMC1A-203ENST00000428014 CNPY2Q9Y2B0 182 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 RIPK3Q9Y572 518 aa10.67□□□□□ -0.7
SMC1A-203ENST00000428014 ABCB11O95342 1321 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 PEX10O60683 326 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 TFRCP02786 760 aaKnown RBP10.66□□□□□ -0.7
SMC1A-203ENST00000428014 CST5P28325 142 aaPredicted RBP10.66□□□□□ -0.7
SMC1A-203ENST00000428014 KIF5BP33176 963 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 CREB3L3Q68CJ9 461 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 MCF2L2Q86YR7 1114 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 TRERF1Q96PN7 1200 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
SMC1A-203ENST00000428014 RIOX1Q9H6W3 641 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 NR2E3Q9Y5X4 410 aa10.66□□□□□ -0.7
SMC1A-203ENST00000428014 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
SMC1A-203ENST00000428014 SLC27A2O14975 620 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
SMC1A-203ENST00000428014 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
SMC1A-203ENST00000428014 EDNRBP24530 442 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 GRM4Q14833 912 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 WTAPQ15007 396 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 SNX17Q15036 470 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 CYB5R4Q7L1T6 521 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 CATIPQ7Z7H3 387 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 CPXCR1Q8N123 301 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 IL27Q8NEV9 243 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 SPZ1Q9BXG8 430 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 VTA1Q9NP79 307 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 FAM184BQ9ULE4 1060 aa10.65□□□□□ -0.7
SMC1A-203ENST00000428014 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
SMC1A-203ENST00000428014 FRMPD3Q5JV73 1810 aa10.65□□□□□ -0.71
SMC1A-203ENST00000428014 KLRF2D3W0D1 207 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 ZBTB5O15062 677 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 RARBP10826 455 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 CYP2C19P33261 490 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 HSPA4P34932 840 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 ANTXR2P58335 489 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 TRIM32Q13049 653 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 FGD4Q96M96 766 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 AGBL1Q96MI9 1066 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 IWS1Q96ST2 819 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 AMNQ9BXJ7 453 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 AGXT2Q9BYV1 514 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 KATNBL1Q9H079 304 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 UPF3AQ9H1J1 476 aaKnown RBP10.64□□□□□ -0.71
SMC1A-203ENST00000428014 C11orf49Q9H6J7 331 aa10.64□□□□□ -0.71
SMC1A-203ENST00000428014 MAD2L2Q9UI95 211 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms