RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TRMT44Q8IYL2 757 aaKnown RBP24.62■■□□□ 1.53
CNEP1R1-202ENST00000427478 MTMR14Q8NCE2 650 aa24.62■■□□□ 1.53
CNEP1R1-202ENST00000427478 GMCL1Q96IK5 515 aa24.62■■□□□ 1.53
CNEP1R1-202ENST00000427478 GSDMAQ96QA5 445 aa24.62■■□□□ 1.53
CNEP1R1-202ENST00000427478 TMEM39BQ9GZU3 492 aa24.62■■□□□ 1.53
CNEP1R1-202ENST00000427478 CLK2P49760 499 aaKnown RBP24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 ORC2Q13416 577 aaPredicted RBP24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 FILIP1Q7Z7B0 1213 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 JDP2Q8WYK2 163 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 A0A1W2PRG0 241 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 MRPL12P52815 198 aaKnown RBP24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 CUL4BQ13620 913 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 RRAGBQ5VZM2 374 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 CCSER1Q9C0I3 900 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 PSTPIP2Q9H939 334 aa24.61■■□□□ 1.53
CNEP1R1-202ENST00000427478 NFKBIEO00221 500 aa24.6■■□□□ 1.53
CNEP1R1-202ENST00000427478 GTPBP6O43824 516 aaPredicted RBP24.6■■□□□ 1.53
CNEP1R1-202ENST00000427478 TDP2O95551 362 aa24.6■■□□□ 1.53
CNEP1R1-202ENST00000427478 IKQ13123 557 aaPredicted RBP24.6■■□□□ 1.53
CNEP1R1-202ENST00000427478 PLIN2Q99541 437 aa24.6■■□□□ 1.53
CNEP1R1-202ENST00000427478 SHTN1A0MZ66 631 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 MYO1BO43795 1136 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 EDIL3O43854 480 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 OFD1O75665 1012 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 SNAP25P60880 206 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 CACTINQ8WUQ7 758 aaKnown RBP24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 PCDHA1Q9Y5I3 950 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 SLC37A4O43826 429 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 SERPINC1P01008 464 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 BMP3P12645 472 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 TECP42680 631 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 NBPF9Q3BBW0 867 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 NAALADL2Q58DX5 795 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 FKBP1CQ5VVH2 108 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 KIAA1524Q8TCG1 905 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 AK8Q96MA6 479 aa24.59■■□□□ 1.53
CNEP1R1-202ENST00000427478 TMEM232C9JQI7 657 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 ECE1P42892 770 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 ARID5BQ14865 1188 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 NOLC1Q14978 699 aaKnown RBP eCLIP24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 CALCRLQ16602 461 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 HSP90AA4PQ58FG1 418 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 CABP7Q86V35 215 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 SMYD4Q8IYR2 804 aaPredicted RBP24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 SPICE1Q8N0Z3 855 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 ENOX1Q8TC92 643 aaKnown RBP24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 NFE2L3Q9Y4A8 694 aa24.58■■□□□ 1.53
CNEP1R1-202ENST00000427478 WNT10BO00744 389 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 CD44P16070 742 aaKnown RBP24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 SYDE2Q5VT97 1194 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 MIGA2Q7L4E1 593 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 DPF2Q92785 391 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 ZBED3Q96IU2 234 aaPredicted RBP24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 MED15Q96RN5 788 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 ARHGEF10LQ9HCE6 1279 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 MYOZ2Q9NPC6 264 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 ZBTB21Q9ULJ3 1066 aa24.58■■□□□ 1.52
CNEP1R1-202ENST00000427478 TXKP42681 527 aa24.57■■□□□ 1.52
CNEP1R1-202ENST00000427478 KLHL10Q6JEL2 608 aa24.57■■□□□ 1.52
CNEP1R1-202ENST00000427478 FAM83AQ86UY5 434 aa24.57■■□□□ 1.52
CNEP1R1-202ENST00000427478 BCS1LQ9Y276 419 aa24.57■■□□□ 1.52
CNEP1R1-202ENST00000427478 ERCC5P28715 1186 aaPredicted RBP24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 UBASH3AP57075 661 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 TMC6Q7Z403 805 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 ACER1Q8TDN7 264 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 MTMR9Q96QG7 549 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L15C9J2P7 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L13C9JLJ4 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L11C9JVI0 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L18D6R9N7 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L22D6RA61 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L17D6RBQ6 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L19D6RCP7 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L20D6RJB6 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L24Q0WX57 530 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 USP17L6PQ6QN14 398 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 LRRC8AQ8IWT6 810 aa24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.56■■□□□ 1.52
CNEP1R1-202ENST00000427478 LRRC15Q8TF66 581 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 SCAF8Q9UPN6 1271 aaKnown RBP24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 SYNRGQ9UMZ2 1314 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 CBFA2T2O43439 604 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 RPN1P04843 607 aaKnown RBP24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 PLCG1P19174 1290 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 TNIP1Q15025 636 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 USH1GQ495M9 461 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 IGSF22Q8N9C0 903 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 AMNQ9BXJ7 453 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 SYNPO2Q9UMS6 1093 aa24.55■■□□□ 1.52
CNEP1R1-202ENST00000427478 ATAD5Q96QE3 1844 aa24.54■■□□□ 1.52
CNEP1R1-202ENST00000427478 STX17P56962 302 aa24.54■■□□□ 1.52
CNEP1R1-202ENST00000427478 CT47A1Q5JQC4 288 aaPredicted RBP24.54■■□□□ 1.52
CNEP1R1-202ENST00000427478 GLT8D2Q9H1C3 349 aa24.54■■□□□ 1.52
CNEP1R1-202ENST00000427478 IMPACTQ9P2X3 320 aa24.54■■□□□ 1.52
CNEP1R1-202ENST00000427478 PPP1R3GB7ZBB8 358 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 TBC1D12O60347 775 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 ZNF18P17022 549 aa24.53■■□□□ 1.52
CNEP1R1-202ENST00000427478 KIAA1755Q5JYT7 1200 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms