RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CHST13Q8NET6 341 aa17.76■□□□□ 0.43
COL11A1-204ENST00000427239 COA7Q96BR5 231 aa17.76■□□□□ 0.43
COL11A1-204ENST00000427239 MOV10L1Q9BXT6 1211 aaKnown RBP17.76■□□□□ 0.43
COL11A1-204ENST00000427239 MROH8Q9H579 483 aa17.76■□□□□ 0.43
COL11A1-204ENST00000427239 CWC22Q9HCG8 908 aaKnown RBP17.76■□□□□ 0.43
COL11A1-204ENST00000427239 FBXO40Q9UH90 709 aa17.76■□□□□ 0.43
COL11A1-204ENST00000427239 DTNBO60941 627 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 ALAS1P13196 640 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 PDCP20941 246 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 SLC4A3P48751 1232 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
COL11A1-204ENST00000427239 RGS22Q8NE09 1264 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
COL11A1-204ENST00000427239 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 RIPK3Q9Y572 518 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 STXBP3O00186 592 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 TBC1D8O95759 1140 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 PDIA4P13667 645 aaKnown RBP17.75■□□□□ 0.43
COL11A1-204ENST00000427239 NAPAP54920 295 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 TRIM29Q14134 588 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 MCF2L2Q86YR7 1114 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
COL11A1-204ENST00000427239 PEX10O60683 326 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 ERCC3P19447 782 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 MAPK4P31152 587 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 NOM1Q5C9Z4 860 aaKnown RBP17.74■□□□□ 0.43
COL11A1-204ENST00000427239 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 NCAPG2Q86XI2 1143 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 AIFM3Q96NN9 605 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 ACAD9Q9H845 621 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 WBP1LQ9NX94 342 aa17.74■□□□□ 0.43
COL11A1-204ENST00000427239 MAP3K20Q9NYL2 800 aaKnown RBP17.74■□□□□ 0.43
COL11A1-204ENST00000427239 A0A0G2JMZ2 1700 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 ESYT2A0FGR8 921 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 GNA11P29992 359 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 MRPL12P52815 198 aaKnown RBP17.73■□□□□ 0.43
COL11A1-204ENST00000427239 LARP1BQ659C4 914 aaKnown RBP17.73■□□□□ 0.43
COL11A1-204ENST00000427239 SPRYD3Q8NCJ5 442 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 C8orf76Q96K31 380 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 ZMYND12Q9H0C1 365 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 R3HDMLQ9H3Y0 253 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 PSTPIP2Q9H939 334 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 C6orf50Q9HD87 102 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 HOMER2Q9NSB8 354 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 VPS54Q9P1Q0 977 aa17.73■□□□□ 0.43
COL11A1-204ENST00000427239 SMCO2A6NFE2 343 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 STRNO43815 780 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 CALML3P27482 149 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL11A1-204ENST00000427239 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 FBXO18Q8NFZ0 1043 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 CLEC4DQ8WXI8 215 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
COL11A1-204ENST00000427239 NLRP5P59047 1200 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 SP3Q02447 781 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 TYW1BQ6NUM6 668 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 CUL5Q93034 780 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 PHF20Q9BVI0 1012 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 PORCNQ9H237 461 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 RIC8AQ9NPQ8 531 aa17.72■□□□□ 0.43
COL11A1-204ENST00000427239 MUM1L1Q5H9M0 696 aa17.71■□□□□ 0.43
COL11A1-204ENST00000427239 EFCC1Q9HA90 598 aa17.71■□□□□ 0.43
COL11A1-204ENST00000427239 IVNS1ABPQ9Y6Y0 642 aa17.71■□□□□ 0.43
COL11A1-204ENST00000427239 COL11A1P12107 1806 aaPredicted RBP17.71■□□□□ 0.43
COL11A1-204ENST00000427239 GPR25O00155 361 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 NFIBO00712 420 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 OPLAHO14841 1288 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 FCER1AP12319 257 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 ADCY7P51828 1080 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 GHRHRQ02643 423 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 KIF22Q14807 665 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 WDR78Q5VTH9 848 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 KRT40Q6A162 431 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 ABRAQ8N0Z2 381 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 ANKRD35Q8N283 1001 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 PFASO15067 1338 aa17.7■□□□□ 0.42
COL11A1-204ENST00000427239 H3BQV1 296 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
COL11A1-204ENST00000427239 CFBP00751 764 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 MMP1P03956 469 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 POLR2MP0CAP2 368 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 LACTBP83111 547 aaPredicted RBP17.69■□□□□ 0.42
COL11A1-204ENST00000427239 KCTD2Q14681 263 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
COL11A1-204ENST00000427239 IFFO2Q5TF58 517 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 GJB4Q9NTQ9 266 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 KCNJ14Q9UNX9 436 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 MYH6P13533 1939 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 TAL1P17542 331 aaPredicted RBP17.69■□□□□ 0.42
COL11A1-204ENST00000427239 SYT1P21579 422 aa17.69■□□□□ 0.42
COL11A1-204ENST00000427239 HSD17B4P51659 736 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms