RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SLC12A7Q9Y666 1083 aa20.98■□□□□ 0.95
HERC3-205ENST00000426683 CPA1P15085 419 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 CNTN2Q02246 1040 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 SLC35G1Q2M3R5 365 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 ZNF467Q7Z7K2 595 aaPredicted RBP20.97■□□□□ 0.95
HERC3-205ENST00000426683 SGMS1Q86VZ5 419 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 MSL3Q8N5Y2 521 aaKnown RBP20.97■□□□□ 0.95
HERC3-205ENST00000426683 FAM133AQ8N9E0 248 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 FGD4Q96M96 766 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 KIAA0100Q14667 2235 aaKnown RBP20.97■□□□□ 0.95
HERC3-205ENST00000426683 BRCA2P51587 3418 aa20.97■□□□□ 0.95
HERC3-205ENST00000426683 CALM1P0DP23 149 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 CALM2P0DP24 149 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 CALM3P0DP25 149 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 CAPN2P17655 700 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 RXRAP19793 462 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 KIF5BP33176 963 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 BLOC1S2Q6QNY1 142 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 MAMDC4Q6UXC1 1216 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 FBXO11Q86XK2 927 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 HOMER1Q86YM7 354 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 RAB11FIP4Q86YS3 637 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 MTMR8Q96EF0 704 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 RIOX1Q9H6W3 641 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 DDX20Q9UHI6 824 aaKnown RBP20.96■□□□□ 0.95
HERC3-205ENST00000426683 ABCB11O95342 1321 aa20.96■□□□□ 0.95
HERC3-205ENST00000426683 ZNFX1Q9P2E3 1918 aaKnown RBP20.96■□□□□ 0.95
HERC3-205ENST00000426683 PTPDC1A2A3K4 754 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 SOWAHBA6NEL2 793 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 ZBTB5O15062 677 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 CYTH3O43739 400 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 BAATQ14032 418 aaPredicted RBP20.95■□□□□ 0.94
HERC3-205ENST00000426683 LHX8Q68G74 356 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 SYNE3Q6ZMZ3 975 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 RNF207Q6ZRF8 634 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 CCDC144CPQ8IYA2 1237 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 PIGSQ96S52 555 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 AMNQ9BXJ7 453 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 NRBP1Q9UHY1 535 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 OGDHLQ9ULD0 1010 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 CNPY2Q9Y2B0 182 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 SYNGAP1Q96PV0 1343 aa20.95■□□□□ 0.94
HERC3-205ENST00000426683 SEPT4O43236 478 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 MSCO60682 206 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 FARP2O94887 1054 aaPredicted RBP20.94■□□□□ 0.94
HERC3-205ENST00000426683 SNAI1O95863 264 aaPredicted RBP20.94■□□□□ 0.94
HERC3-205ENST00000426683 PSMA5P28066 241 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 GNAQP50148 359 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 FGD1P98174 961 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 SLC30A10Q6XR72 485 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 ARMCX2Q7L311 632 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 MICU3Q86XE3 530 aa20.94■□□□□ 0.94
HERC3-205ENST00000426683 PURBQ96QR8 312 aaKnown RBP20.94■□□□□ 0.94
HERC3-205ENST00000426683 PLXNA1Q9UIW2 1896 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 PPP1R11O60927 126 aaPredicted RBP20.93■□□□□ 0.94
HERC3-205ENST00000426683 PLEKHA8P1O95397 391 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 CASTP20810 708 aaKnown RBP20.93■□□□□ 0.94
HERC3-205ENST00000426683 RPS6KB1P23443 525 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 CALML3P27482 149 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 Q6ZUG5 572 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 LZTS2Q9BRK4 669 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.93■□□□□ 0.94
HERC3-205ENST00000426683 BRPF3Q9ULD4 1205 aa20.93■□□□□ 0.94
HERC3-205ENST00000426683 MRPL11Q9Y3B7 192 aaKnown RBP20.93■□□□□ 0.94
HERC3-205ENST00000426683 ZNF865P0CJ78 1059 aaPredicted RBP20.92■□□□□ 0.94
HERC3-205ENST00000426683 RPS6P62753 249 aaKnown RBP20.92■□□□□ 0.94
HERC3-205ENST00000426683 ANO1Q5XXA6 986 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 APOA5Q6Q788 366 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 UBE2Q1Q7Z7E8 422 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 ANKLE1Q8NAG6 615 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 FANCBQ8NB91 859 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 RGS22Q8NE09 1264 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 PIBF1Q8WXW3 757 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 SPZ1Q9BXG8 430 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 ZHX1Q9UKY1 873 aaPredicted RBP20.92■□□□□ 0.94
HERC3-205ENST00000426683 ASTN1O14525 1302 aa20.92■□□□□ 0.94
HERC3-205ENST00000426683 PNMA6FA0A0J9YX94 578 aa20.91■□□□□ 0.94
HERC3-205ENST00000426683 KLF18A0A0U1RQI7 1052 aa20.91■□□□□ 0.94
HERC3-205ENST00000426683 ASB14A6NK59 587 aa20.91■□□□□ 0.94
HERC3-205ENST00000426683 SMARCA1P28370 1054 aa20.91■□□□□ 0.94
HERC3-205ENST00000426683 MCF2L2Q86YR7 1114 aa20.91■□□□□ 0.94
HERC3-205ENST00000426683 SRBD1Q8N5C6 995 aaKnown RBP20.91■□□□□ 0.94
HERC3-205ENST00000426683 ADD3Q9UEY8 706 aaKnown RBP20.91■□□□□ 0.94
HERC3-205ENST00000426683 PCDHA1Q9Y5I3 950 aa20.91■□□□□ 0.94
HERC3-205ENST00000426683 SMCHD1A6NHR9 2005 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 ZBTB43O43298 467 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 EIF5BO60841 1220 aaKnown RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 ACVR2BQ13705 512 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 CMTR1Q8N1G2 835 aaKnown RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 DIS3LQ8TF46 1054 aaKnown RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 TBC1D5Q92609 795 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 BRF1Q92994 677 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 RRP36Q96EU6 259 aaKnown RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 PAWRQ96IZ0 340 aaKnown RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 ABHD16BQ9H3Z7 469 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 ZSWIM6Q9HCJ5 1215 aa20.9■□□□□ 0.94
HERC3-205ENST00000426683 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 DDX49Q9Y6V7 483 aaKnown RBP20.9■□□□□ 0.94
HERC3-205ENST00000426683 AKR1A1P14550 325 aa20.89■□□□□ 0.93
HERC3-205ENST00000426683 MNX1P50219 401 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms