RNA–Protein interactions for RNA: ENST00000426677.6

TOMM40-203, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-203ENST00000426677 CPXCR1Q8N123 301 aa27.58■■■□□ 2.01
TOMM40-203ENST00000426677 R3HDMLQ9H3Y0 253 aa27.58■■■□□ 2.01
TOMM40-203ENST00000426677 BTBD7Q9P203 1132 aa27.58■■■□□ 2.01
TOMM40-203ENST00000426677 SEC63Q9UGP8 760 aaKnown RBP27.58■■■□□ 2.01
TOMM40-203ENST00000426677 IRX3P78415 501 aaPredicted RBP27.58■■■□□ 2.01
TOMM40-203ENST00000426677 KIF23Q02241 960 aaPredicted RBP27.58■■■□□ 2.01
TOMM40-203ENST00000426677 ATL3Q6DD88 541 aa27.58■■■□□ 2.01
TOMM40-203ENST00000426677 TXNRD2Q9NNW7 524 aa27.58■■■□□ 2.01
TOMM40-203ENST00000426677 HERVK_113P62684 666 aa27.57■■■□□ 2
TOMM40-203ENST00000426677 TMEM132BQ14DG7 1078 aa27.57■■■□□ 2
TOMM40-203ENST00000426677 KRT40Q6A162 431 aa27.57■■■□□ 2
TOMM40-203ENST00000426677 ANKRD23Q86SG2 305 aa27.57■■■□□ 2
TOMM40-203ENST00000426677 SYAP1Q96A49 352 aaPredicted RBP27.57■■■□□ 2
TOMM40-203ENST00000426677 SPATA32Q96LK8 384 aa27.57■■■□□ 2
TOMM40-203ENST00000426677 CFAP45Q9UL16 551 aa27.57■■■□□ 2
TOMM40-203ENST00000426677 CNMDO75829 334 aa27.56■■■□□ 2
TOMM40-203ENST00000426677 MRE11P49959 708 aa27.56■■■□□ 2
TOMM40-203ENST00000426677 NPY5RQ15761 445 aa27.56■■■□□ 2
TOMM40-203ENST00000426677 BARHL2Q9NY43 387 aa27.56■■■□□ 2
TOMM40-203ENST00000426677 RIPK3Q9Y572 518 aa27.56■■■□□ 2
TOMM40-203ENST00000426677 MANSC4A6NHS7 340 aaPredicted RBP27.55■■■□□ 2
TOMM40-203ENST00000426677 XRCC6P12956 609 aaKnown RBP eCLIP27.55■■■□□ 2
TOMM40-203ENST00000426677 FBXO11Q86XK2 927 aa27.55■■■□□ 2
TOMM40-203ENST00000426677 ZNF214Q9UL59 606 aaPredicted RBP27.55■■■□□ 2
TOMM40-203ENST00000426677 OPLAHO14841 1288 aa27.55■■■□□ 2
TOMM40-203ENST00000426677 OXER1Q8TDS5 423 aa27.55■■■□□ 2
TOMM40-203ENST00000426677 GRPEL1Q9HAV7 217 aa27.55■■■□□ 2
TOMM40-203ENST00000426677 RBBP6Q7Z6E9 1792 aaKnown RBP27.54■■■□□ 2
TOMM40-203ENST00000426677 NOM1Q5C9Z4 860 aaKnown RBP27.54■■■□□ 2
TOMM40-203ENST00000426677 IFNL1Q8IU54 200 aa27.54■■■□□ 2
TOMM40-203ENST00000426677 PAGR1Q9BTK6 254 aa27.54■■■□□ 2
TOMM40-203ENST00000426677 RCOR1Q9UKL0 485 aa27.54■■■□□ 2
TOMM40-203ENST00000426677 PCDHA1Q9Y5I3 950 aa27.54■■■□□ 2
TOMM40-203ENST00000426677 KIF28PB7ZC32 967 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 VEGFBP49765 207 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 NAPAP54920 295 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 LBX2Q6XYB7 198 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 ZNF396Q96N95 335 aaPredicted RBP27.53■■■□□ 2
TOMM40-203ENST00000426677 PHF20Q9BVI0 1012 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 HOXC10Q9NYD6 342 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 RBPJLQ9UBG7 517 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 MYPNQ86TC9 1320 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 ICAM1P05362 532 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 OSBPP22059 807 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 WASF1Q92558 559 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 AMNQ9BXJ7 453 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 HOMER2Q9NSB8 354 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 CCPG1Q9ULG6 757 aa27.53■■■□□ 2
TOMM40-203ENST00000426677 ZBED4O75132 1171 aa27.52■■■□□ 2
TOMM40-203ENST00000426677 MUM1L1Q5H9M0 696 aa27.52■■■□□ 2
TOMM40-203ENST00000426677 BRAPQ7Z569 592 aa27.52■■■□□ 2
TOMM40-203ENST00000426677 TBC1D5Q92609 795 aa27.52■■■□□ 2
TOMM40-203ENST00000426677 USP28Q96RU2 1077 aa27.52■■■□□ 2
TOMM40-203ENST00000426677 SYCE3A1L190 88 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 PLS1Q14651 629 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 Q3C1V9 767 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 CCDC183Q5T5S1 534 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 LRSAM1Q6UWE0 723 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 RASGRP4Q8TDF6 673 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 PGBD1Q96JS3 809 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 LCTP09848 1927 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 THSD7BQ9C0I4 1608 aa27.51■■□□□ 1.99
TOMM40-203ENST00000426677 MMP1P03956 469 aa27.5■■□□□ 1.99
TOMM40-203ENST00000426677 PABPC4Q13310 644 aaKnown RBP eCLIP27.5■■□□□ 1.993e-10■□□□□ 10.7
TOMM40-203ENST00000426677 SNRNP48Q6IEG0 339 aaKnown RBP27.5■■□□□ 1.99
TOMM40-203ENST00000426677 SLC45A1Q9Y2W3 748 aa27.5■■□□□ 1.99
TOMM40-203ENST00000426677 ALAS1P13196 640 aa27.5■■□□□ 1.99
TOMM40-203ENST00000426677 NR5A1Q13285 461 aa27.5■■□□□ 1.99
TOMM40-203ENST00000426677 ADGRA2Q96PE1 1338 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 FAM205CA6NFA0 338 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 NFIBO00712 420 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 TM4SF4P48230 202 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 C1QTNF8P60827 252 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 NOGQ13253 232 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 UBE2SQ16763 222 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 EARS2Q5JPH6 523 aaKnown RBP27.49■■□□□ 1.99
TOMM40-203ENST00000426677 CEP350Q5VT06 3117 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 ZSWIM8A7E2V4 1837 aa27.49■■□□□ 1.99
TOMM40-203ENST00000426677 SMCO2A6NFE2 343 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 BTBD18B2RXH4 712 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 NLRP5P59047 1200 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 SMCR8Q8TEV9 937 aaPredicted RBP27.48■■□□□ 1.99
TOMM40-203ENST00000426677 CLEC4DQ8WXI8 215 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 FTOQ9C0B1 505 aaKnown RBP eCLIP27.48■■□□□ 1.99
TOMM40-203ENST00000426677 SH3GLB2Q9NR46 395 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 TMEM260Q9NX78 707 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 RTEL1Q9NZ71 1219 aa27.48■■□□□ 1.99
TOMM40-203ENST00000426677 CTDP1Q9Y5B0 961 aaPredicted RBP27.48■■□□□ 1.99
TOMM40-203ENST00000426677 MYSM1Q5VVJ2 828 aa27.47■■□□□ 1.99
TOMM40-203ENST00000426677 ANKRD13CQ8N6S4 541 aa27.47■■□□□ 1.99
TOMM40-203ENST00000426677 ZMYND12Q9H0C1 365 aa27.47■■□□□ 1.99
TOMM40-203ENST00000426677 PNMA3Q9UL41 463 aa27.47■■□□□ 1.99
TOMM40-203ENST00000426677 TAF1CQ15572 869 aaPredicted RBP27.47■■□□□ 1.99
TOMM40-203ENST00000426677 TPRNQ4KMQ1 711 aa27.47■■□□□ 1.99
TOMM40-203ENST00000426677 DIS3L2Q8IYB7 885 aaKnown RBP27.47■■□□□ 1.99
TOMM40-203ENST00000426677 U2AF2P26368 475 aaKnown RBP eCLIP27.46■■□□□ 1.99
TOMM40-203ENST00000426677 STAT3P40763 770 aa27.46■■□□□ 1.99
TOMM40-203ENST00000426677 SREBF2Q12772 1141 aa27.46■■□□□ 1.99
TOMM40-203ENST00000426677 TRIM29Q14134 588 aa27.46■■□□□ 1.99
TOMM40-203ENST00000426677 USP17L6PQ6QN14 398 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms