RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
ACTB-204ENST00000425660 MCTP2Q6DN12 878 aa17.27■□□□□ 0.36
ACTB-204ENST00000425660 CCDC84Q86UT8 332 aaPredicted RBP17.27■□□□□ 0.36
ACTB-204ENST00000425660 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
ACTB-204ENST00000425660 SSC5DA1L4H1 1573 aa17.27■□□□□ 0.35
ACTB-204ENST00000425660 MEIS2O14770 477 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 WDR46O15213 610 aaKnown RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 ACTN4O43707 911 aaKnown RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 NEMFO60524 1076 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 UBE2SQ16763 222 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 PPP4R3AQ6IN85 833 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 DTHD1Q6ZMT9 781 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 L3MBTL3Q96JM7 780 aaPredicted RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 PPP1R9BQ96SB3 815 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 FEZ1Q99689 392 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 WDR18Q9BV38 432 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 ANO10Q9NW15 660 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 A0A087X0B3 334 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 CCDC173Q0VFZ6 552 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 KANK3Q6NY19 840 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 PDLIM2Q96JY6 352 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 PYM1Q9BRP8 204 aaKnown RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 USP25Q9UHP3 1055 aa17.26■□□□□ 0.35
ACTB-204ENST00000425660 HOOK1Q9UJC3 728 aaKnown RBP17.26■□□□□ 0.35
ACTB-204ENST00000425660 DOCK1Q14185 1865 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 PIK3CDO00329 1044 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 OPLAHO14841 1288 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 OR52Z1P0C646 297 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 ZNF165P49910 485 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 SNAP25P60880 206 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
ACTB-204ENST00000425660 USP17L15C9J2P7 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L13C9JLJ4 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L11C9JVI0 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L18D6R9N7 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L22D6RA61 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L17D6RBQ6 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L19D6RCP7 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L20D6RJB6 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 SLFN14P0C7P3 912 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L24Q0WX57 530 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 AK8Q96MA6 479 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 CBX8Q9HC52 389 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 GCFC2P16383 781 aaKnown RBP17.24■□□□□ 0.35
ACTB-204ENST00000425660 PTPRAP18433 802 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 USP14P54578 494 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 E2F4Q16254 413 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
ACTB-204ENST00000425660 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 PDILTQ8N807 584 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 SPATA20Q8TB22 786 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
ACTB-204ENST00000425660 SERTAD1Q9UHV2 236 aa17.24■□□□□ 0.35
ACTB-204ENST00000425660 FOSP01100 380 aaPredicted RBP17.23■□□□□ 0.35
ACTB-204ENST00000425660 USP11P51784 963 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 PNOCQ13519 176 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 POSTNQ15063 836 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 USH1GQ495M9 461 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
ACTB-204ENST00000425660 KIFC2Q96AC6 838 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 CCDC34Q96HJ3 373 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 CCSER1Q9C0I3 900 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
ACTB-204ENST00000425660 SARSP49591 514 aaKnown RBP17.22■□□□□ 0.35
ACTB-204ENST00000425660 BACE1P56817 501 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 MTMR2Q13614 643 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 IQCB1Q15051 598 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 MOXD1Q6UVY6 613 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
ACTB-204ENST00000425660 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 PRPF38AQ8NAV1 312 aaKnown RBP17.22■□□□□ 0.35
ACTB-204ENST00000425660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.22■□□□□ 0.359e-78■■□□□ 11.7
ACTB-204ENST00000425660 ANO3Q9BYT9 981 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
ACTB-204ENST00000425660 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 SLC37A4O43826 429 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 TDP2O95551 362 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 VCAM1P19320 739 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 CYP3A7P24462 503 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 TXLNAP40222 546 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 NLRP12P59046 1061 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 DPCR1Q3MIW9 517 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 LUZP1Q86V48 1076 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms