RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 FOSP01100 380 aaPredicted RBP10.72□□□□□ -0.69
HMGB4-201ENST00000425537 MYL1P05976 194 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 OR52Z1P0C646 297 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 CAP2P40123 477 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 AP3B2Q13367 1082 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 POSTNQ15063 836 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 INF2Q27J81 1249 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 KIF4BQ2VIQ3 1234 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 EARS2Q5JPH6 523 aaKnown RBP10.72□□□□□ -0.69
HMGB4-201ENST00000425537 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 MAP1SQ66K74 1059 aaPredicted RBP10.72□□□□□ -0.69
HMGB4-201ENST00000425537 KCTD1Q719H9 257 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.72□□□□□ -0.69
HMGB4-201ENST00000425537 FBXO11Q86XK2 927 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 CUEDC2Q9H467 287 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 PSTPIP2Q9H939 334 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 MAGEF1Q9HAY2 307 aa10.72□□□□□ -0.69
HMGB4-201ENST00000425537 IQCA1LA6NCM1 817 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 IKBKBO14920 756 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 SLC26A4O43511 780 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 NEMFO60524 1076 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 CCNT1O60563 726 aaKnown RBP10.71□□□□□ -0.69
HMGB4-201ENST00000425537 UBA7P41226 1012 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 STAT2P52630 851 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 CDC37Q16543 378 aaPredicted RBP10.71□□□□□ -0.69
HMGB4-201ENST00000425537 NBPF9Q3BBW0 867 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 LONRF3Q496Y0 759 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 SARM1Q6SZW1 724 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 MLKLQ8NB16 471 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 RASSF8Q8NHQ8 419 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
HMGB4-201ENST00000425537 CCDC47Q96A33 483 aaKnown RBP10.71□□□□□ -0.69
HMGB4-201ENST00000425537 COA7Q96BR5 231 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 EHMT1Q9H9B1 1298 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 ADARB2Q9NS39 739 aaKnown RBP10.71□□□□□ -0.69
HMGB4-201ENST00000425537 RMND1Q9NWS8 449 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 SERTAD1Q9UHV2 236 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 PCDHA1Q9Y5I3 950 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 PPP2R3BQ9Y5P8 575 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 STK24Q9Y6E0 443 aa10.71□□□□□ -0.69
HMGB4-201ENST00000425537 TMEM232C9JQI7 657 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 ADM5C9JUS6 153 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 TRAF5O00463 557 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 CTNND1O60716 968 aaKnown RBP10.7□□□□□ -0.7
HMGB4-201ENST00000425537 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
HMGB4-201ENST00000425537 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
HMGB4-201ENST00000425537 SLC16A2P36021 539 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 RASA3Q14644 834 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 IQCB1Q15051 598 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 QRICH1Q2TAL8 776 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 NT5DC1Q5TFE4 455 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 JAKMIP3Q5VZ66 844 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 PPP4R3AQ6IN85 833 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 TTBK2Q6IQ55 1244 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 LUZP1Q86V48 1076 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 SIAH1Q8IUQ4 282 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 C4orf32Q8N8J7 132 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 TBCKQ8TEA7 893 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 DHX58Q96C10 678 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 GSDMAQ96QA5 445 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 GLIS2Q9BZE0 524 aaPredicted RBP10.7□□□□□ -0.7
HMGB4-201ENST00000425537 TRIM5Q9C035 493 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 CCSER1Q9C0I3 900 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 TMEM39BQ9GZU3 492 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 BIN2Q9UBW5 565 aaPredicted RBP10.7□□□□□ -0.7
HMGB4-201ENST00000425537 FEM1BQ9UK73 627 aa10.7□□□□□ -0.7
HMGB4-201ENST00000425537 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
HMGB4-201ENST00000425537 MARCH6O60337 910 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 FDX1P10109 184 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 CDC25BP30305 580 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 DSG3P32926 999 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 STAT6P42226 847 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 USP11P51784 963 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 USP14P54578 494 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
HMGB4-201ENST00000425537 AMPD3Q01432 767 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 PNOCQ13519 176 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 CALCRLQ16602 461 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 SPECC1Q5M775 1068 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 ANGEL2Q5VTE6 544 aaKnown RBP10.69□□□□□ -0.7
HMGB4-201ENST00000425537 PRAMEF18Q5VWM3 479 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 RRAGBQ5VZM2 374 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 MOXD1Q6UVY6 613 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 C11orf57Q6ZUT1 292 aaPredicted RBP10.69□□□□□ -0.7
HMGB4-201ENST00000425537 ZSCAN30Q86W11 494 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 PDILTQ8N807 584 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 LPAR1Q92633 364 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 CALML4Q96GE6 196 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 EPSTI1Q96J88 318 aa10.69□□□□□ -0.7
HMGB4-201ENST00000425537 FEZ1Q99689 392 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms