RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 CHP1Q99653 195 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 CTTNBP2NLQ9P2B4 639 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 HPS5Q9UPZ3 1129 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 KIDINS220Q9ULH0 1771 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 A0A1W2PRG0 241 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 GBP2P32456 591 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 CCT5P48643 541 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 SH3RF3Q8TEJ3 882 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 MFAP3LO75121 409 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 GDF11O95390 407 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 MYZAPP0CAP1 466 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 SF3B2Q13435 895 aaKnown RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 TTLL12Q14166 644 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 PPP1R7Q15435 360 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 CFAP221Q4G0U5 840 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 CEP85LQ5SZL2 805 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 TAB3Q8N5C8 712 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 MGARPQ8TDB4 240 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 OSBPL5Q9H0X9 879 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 EPB41L4AQ9HCS5 686 aaPredicted RBP11.32□□□□□ -0.6
VPS37A-202ENST00000425020 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 PANK4Q9NVE7 773 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
VPS37A-202ENST00000425020 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
VPS37A-202ENST00000425020 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
VPS37A-202ENST00000425020 BIRC3Q13489 604 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC127Q96BQ5 260 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 DBNDD1Q9H9R9 158 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 ADAMTS1Q9UHI8 967 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 DDX25Q9UHL0 483 aaKnown RBP11.31□□□□□ -0.6
VPS37A-202ENST00000425020 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 MINPP1Q9UNW1 487 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 FRMD4BQ9Y2L6 1034 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 SMIM22K7EJ46 135 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 LONP1P36776 959 aaKnown RBP11.31□□□□□ -0.6
VPS37A-202ENST00000425020 EIF4A3P38919 411 aaKnown RBP11.31□□□□□ -0.6
VPS37A-202ENST00000425020 ADCY1Q08828 1119 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 WHAMMP3Q1A5X7 153 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 KRT71Q3SY84 523 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC155Q8N6L0 562 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 PAF1Q8N7H5 531 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 ENGASEQ8NFI3 743 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 KRT12Q99456 494 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 TMEM260Q9NX78 707 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 PTPRUQ92729 1446 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 ESYT3A0FGR9 886 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 DDAH1O94760 285 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC121Q6ZUS5 278 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 HOOK3Q86VS8 718 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 P2RX5Q93086 422 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 RBM17Q96I25 401 aaKnown RBP11.31□□□□□ -0.6
VPS37A-202ENST00000425020 TSGA10Q9BZW7 698 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
VPS37A-202ENST00000425020 E7EVH7 732 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 LRRN2O75325 713 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 FXR1P51114 621 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 TCP11X2Q5H9J9 407 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 CAPN12Q6ZSI9 719 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 LARP4BQ92615 738 aaKnown RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 TFRCP02786 760 aaKnown RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 ZNF658Q5TYW1 1059 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 FAM133AQ8N9E0 248 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 TTC16Q8NEE8 873 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 DCP1AQ9NPI6 582 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 ARMCX3Q9UH62 379 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 BCS1LQ9Y276 419 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 CEMIPQ8WUJ3 1361 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 ARHGEF35A5YM69 484 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 RNF40O75150 1001 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 CASP8Q14790 479 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 PHLDB2Q86SQ0 1253 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 IFT20Q8IY31 132 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 ADAM21Q9UKJ8 722 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 TCP10L2B9ZVM9 353 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 FCER1AP12319 257 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-202ENST00000425020 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 LMBR1Q8WVP7 490 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 SYNCQ9H7C4 482 aa11.3□□□□□ -0.6
VPS37A-202ENST00000425020 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms