RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 COL24A1Q17RW2 1714 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 TNRC6CQ9HCJ0 1690 aaKnown RBP9.56□□□□□ -0.88
VPS8-204ENST00000424463 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 APBA3O96018 575 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 TBX4P57082 545 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 GPSM2P81274 684 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 ZNF827Q17R98 1081 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 TMEM67Q5HYA8 995 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 NT5DC4Q86YG4 428 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 RELL1Q8IUW5 271 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 ATP11CQ8NB49 1132 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 SPC24Q8NBT2 197 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPS8-204ENST00000424463 ZSCAN16Q9H4T2 348 aaPredicted RBP9.56□□□□□ -0.88
VPS8-204ENST00000424463 DCAF16Q9NXF7 216 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 MCM8Q9UJA3 840 aa9.56□□□□□ -0.88
VPS8-204ENST00000424463 C4AP0C0L4 1744 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 CASZ1Q86V15 1759 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 WDR19Q8NEZ3 1342 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 CD53P19397 219 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 CDC27P30260 824 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 MRPL12P52815 198 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 HDAC4P56524 1084 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 PPARAQ07869 468 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 NEDD9Q14511 834 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 GRIK5Q16478 980 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 KIAA0753Q2KHM9 967 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 NEK10Q6ZWH5 1172 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 PEX5LQ8IYB4 626 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 SH3TC2Q8TF17 1288 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 LEO1Q8WVC0 666 aaPredicted RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 HPS3Q969F9 1004 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 EXOC4Q96A65 974 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 ERP27Q96DN0 273 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 RSRC1Q96IZ7 334 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 SRRTQ9BXP5 876 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 MAK16Q9BXY0 300 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 AATFQ9NY61 560 aaKnown RBP eCLIP9.55□□□□□ -0.881e-10■■■■■ 27.8
VPS8-204ENST00000424463 ORC3Q9UBD5 711 aaPredicted RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 ZMYM6O95789 1325 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 CPLX1O14810 134 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 SEMA3EO15041 775 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 SPTLC2O15270 562 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 HOXA2O43364 376 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 MTRF1O75570 445 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 FGFR1OPO95684 399 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 RPL13P26373 211 aaKnown RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 CTAG1AP78358 180 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 ST5P78524 1137 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 CRY2Q49AN0 593 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 APOA5Q6Q788 366 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 ILDR1Q86SU0 546 aaPredicted RBP9.55□□□□□ -0.88
VPS8-204ENST00000424463 MICU3Q86XE3 530 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
VPS8-204ENST00000424463 BRWD3Q6RI45 1802 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 DOCK2Q92608 1830 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 UBE2Q2LH0YL09 131 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 ZNF189O75820 626 aaPredicted RBP9.54□□□□□ -0.88
VPS8-204ENST00000424463 ABL1P00519 1130 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 METAP2P50579 478 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS8-204ENST00000424463 CDR1P51861 262 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 TMEM62Q0P6H9 643 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
VPS8-204ENST00000424463 TTC39BQ5VTQ0 682 aaPredicted RBP9.54□□□□□ -0.88
VPS8-204ENST00000424463 COL23A1Q86Y22 540 aaPredicted RBP9.54□□□□□ -0.88
VPS8-204ENST00000424463 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 B4GALNT2Q8NHY0 566 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 ERMNQ8TAM6 284 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 PHKBQ93100 1093 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 GSDMAQ96QA5 445 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 MAP3K14Q99558 947 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 BRD8Q9H0E9 1235 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 FAM217BQ9NTX9 383 aaPredicted RBP9.54□□□□□ -0.88
VPS8-204ENST00000424463 SPTLC3Q9NUV7 552 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 C6orf203Q9P0P8 240 aaPredicted RBP9.54□□□□□ -0.88
VPS8-204ENST00000424463 SFMBT1Q9UHJ3 866 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 MRFAP1Q9Y605 127 aa9.54□□□□□ -0.88
VPS8-204ENST00000424463 PRDM1O75626 825 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 SLC4A8Q2Y0W8 1093 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 CCDC183Q5T5S1 534 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 CCDC174Q6PII3 467 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 FAM114A1Q8IWE2 563 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 GOLGA5Q8TBA6 731 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 FAM81AQ8TBF8 368 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 PGBD1Q96JS3 809 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 KRT23Q9C075 422 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 SCAND2PQ9GZW5 306 aaPredicted RBP9.53□□□□□ -0.88
VPS8-204ENST00000424463 CNNM2Q9H8M5 875 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 HDAC6Q9UBN7 1215 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 LEMD3Q9Y2U8 911 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 XDHP47989 1333 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 FAM25EA8MYX2 175 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 USP17L12C9JPN9 530 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 USP17L21D6R901 530 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 ZBTB43O43298 467 aa9.53□□□□□ -0.88
VPS8-204ENST00000424463 OPA1O60313 960 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms