RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 IQCF3P0C7M6 154 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 NBL1P41271 181 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 NDUFV1P49821 464 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 DEFB103AP81534 67 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 SMAD4Q13485 552 aaKnown RBP7.7□□□□□ -1.18
SDCBP-203ENST00000424270 GPM6BQ13491 265 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 PUM1Q14671 1186 aaKnown RBP eCLIP7.7□□□□□ -1.18
SDCBP-203ENST00000424270 ARMCX2Q7L311 632 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 KIAA2013Q8IYS2 634 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 PLCD3Q8N3E9 789 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 CCDC155Q8N6L0 562 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.7□□□□□ -1.18
SDCBP-203ENST00000424270 FBXO3Q9UK99 471 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 SPTBN4Q9H254 2564 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 CACNA1BQ00975 2339 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
SDCBP-203ENST00000424270 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-203ENST00000424270 A0A1W2PRG0 241 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 WDR46O15213 610 aaKnown RBP7.69□□□□□ -1.18
SDCBP-203ENST00000424270 GJB5O95377 273 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 MCAMP43121 646 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 RFX5P48382 616 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-203ENST00000424270 NUBP1P53384 320 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 DYNLL1P63167 89 aaKnown RBP7.69□□□□□ -1.18
SDCBP-203ENST00000424270 MAMDC4Q6UXC1 1216 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 CCDC144CPQ8IYA2 1237 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 CPXCR1Q8N123 301 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 MIGA1Q8NAN2 632 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 RPGRIP1Q96KN7 1286 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 TEX13BQ9BXU2 312 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 MFSD1Q9H3U5 465 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 SNRKQ9NRH2 765 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 CD207Q9UJ71 328 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 PA2G4Q9UQ80 394 aaKnown RBP7.69□□□□□ -1.18
SDCBP-203ENST00000424270 INSL6Q9Y581 213 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 GRIN2DO15399 1336 aa7.69□□□□□ -1.18
SDCBP-203ENST00000424270 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 VWA5AO00534 786 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 ICA1Q05084 483 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 IKBKEQ14164 716 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 ACAP1Q15027 740 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 EPC2Q52LR7 807 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 BRDTQ58F21 947 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-203ENST00000424270 EEPD1Q7L9B9 569 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 ZNF467Q7Z7K2 595 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-203ENST00000424270 PPP1R13LQ8WUF5 828 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 VWCEQ96DN2 955 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 DCBLD2Q96PD2 775 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 YME1L1Q96TA2 773 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 EHD4Q9H223 541 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 VCPKMTQ9H867 229 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 GOPCQ9HD26 462 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 HOMER2Q9NSB8 354 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 FBXO28Q9NVF7 368 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 POLR3EQ9NVU0 708 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 RALYQ9UKM9 306 aaKnown RBP7.68□□□□□ -1.18
SDCBP-203ENST00000424270 ISY1Q9ULR0 285 aaKnown RBP7.68□□□□□ -1.18
SDCBP-203ENST00000424270 C5orf42Q9H799 3197 aa7.68□□□□□ -1.18
SDCBP-203ENST00000424270 CTAGE5O15320 804 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 EFCAB14O75071 495 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 ZBED4O75132 1171 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 AMHP03971 560 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 UQCRFS1P1P0C7P4 283 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 UBTFL1P0CB47 393 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-203ENST00000424270 CYP7A1P22680 504 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 SHMT1P34896 483 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 PPP4CP60510 307 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 TFCP2Q12800 502 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 LRRFIP1Q32MZ4 808 aaKnown RBP7.67□□□□□ -1.18
SDCBP-203ENST00000424270 KIAA1755Q5JYT7 1200 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 TTC39AQ5SRH9 613 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 CNKSR3Q6P9H4 555 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 TMEM179Q6ZVK1 233 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 ADGRA1Q86SQ6 560 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 WWC1Q8IX03 1113 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 MYOCDQ8IZQ8 938 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 SAMD11Q96NU1 681 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 INCENPQ9NQS7 918 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 PPP1R9AQ9ULJ8 1098 aa7.67□□□□□ -1.18
SDCBP-203ENST00000424270 SALL2Q9Y467 1007 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-203ENST00000424270 PTPRZ1P23471 2315 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-203ENST00000424270 ABHD14A-ACY1A0A1B0GW23 586 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 PDGFBP01127 241 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-203ENST00000424270 SMPD1P17405 629 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 PTGS1P23219 599 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 GUCY1A2P33402 732 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 CPT1AP50416 773 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 DLX2Q07687 328 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-203ENST00000424270 FAM83BQ5T0W9 1011 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 CERS3Q8IU89 383 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 CLEC10AQ8IUN9 316 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 MAGEB6Q8N7X4 407 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 PPP2R3CQ969Q6 453 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 MTG1Q9BT17 334 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-203ENST00000424270 FBXO40Q9UH90 709 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 ZNF214Q9UL59 606 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-203ENST00000424270 ASTN1O14525 1302 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 IL16Q14005 1332 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 KMT2EQ8IZD2 1858 aa7.66□□□□□ -1.18
SDCBP-203ENST00000424270 ASB14A6NK59 587 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 695.1 ms