RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A1CFQ9NQ94 594 aaKnown RBP20■□□□□ 0.79
CHCHD3-202ENST00000423635 MTMR4Q9NYA4 1195 aa20■□□□□ 0.79
CHCHD3-202ENST00000423635 TCF20Q9UGU0 1960 aaKnown RBP19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 DYNC1LI2O43237 492 aaPredicted RBP19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 SMPD1P17405 629 aa19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 TFF2Q03403 129 aa19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 AP5M1Q9H0R1 490 aa19.99■□□□□ 0.79
CHCHD3-202ENST00000423635 TRANK1O15050 2925 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 MINDY4BA8MYZ0 360 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 TTLL1O95922 423 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 PFKMP08237 780 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 BMP3P12645 472 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 ATP2A2P16615 1042 aaKnown RBP19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 TAPT1Q6NXT6 567 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 STK11IPQ8N1F8 1099 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 ZNF287Q9HBT7 754 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 HOMER2Q9NSB8 354 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
CHCHD3-202ENST00000423635 ZNF536O15090 1300 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 KCNQ1P51787 676 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 TKFCQ3LXA3 575 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 SLFN13Q68D06 897 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 MICALL1Q8N3F8 863 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 SCLYQ96I15 445 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 BCL11AQ9H165 835 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 PDGFCQ9NRA1 345 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 COG6Q9Y2V7 657 aa19.97■□□□□ 0.79
CHCHD3-202ENST00000423635 MYH7P12883 1935 aa19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 PSMC6P62333 389 aa19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 TMEM67Q5HYA8 995 aa19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 ALDH8A1Q9H2A2 487 aaPredicted RBP19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 RNF146Q9NTX7 359 aa19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 ZBTB40Q9NUA8 1239 aa19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 COG5Q9UP83 839 aa19.96■□□□□ 0.79
CHCHD3-202ENST00000423635 MYH4Q9Y623 1939 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 ZBBXA8MT70 800 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 TMEM232C9JQI7 657 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 PLA2G6O60733 806 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 SUPT20HL2P0C7V6 817 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 PTGS1P23219 599 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 STAT2P52630 851 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 TTLL4Q14679 1199 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 FAM160B2Q86V87 743 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 LRRC47Q8N1G4 583 aaKnown RBP19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 NEDD1Q8NHV4 660 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 MORC4Q8TE76 937 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 CHURC1Q8WUH1 139 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 STAG1Q8WVM7 1258 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 TRERF1Q96PN7 1200 aa19.95■□□□□ 0.78
CHCHD3-202ENST00000423635 PRRC2BQ5JSZ5 2229 aaKnown RBP19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 RFXAPO00287 272 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 GTPBP6O43824 516 aaPredicted RBP19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 TLL1O43897 1013 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 PRDM1O75626 825 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 PHOSPHO2Q8TCD6 241 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 OSBP2Q969R2 916 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 GMCL1Q96IK5 515 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 LRFN3Q9BTN0 628 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 EPHX3Q9H6B9 360 aa19.94■□□□□ 0.78
CHCHD3-202ENST00000423635 CA3P07451 260 aa19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 MS4A1P11836 297 aa19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 SKIV2LQ15477 1246 aaKnown RBP19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 APPBP2Q92624 585 aa19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 EPB41L4AQ9HCS5 686 aaPredicted RBP19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 VTA1Q9NP79 307 aa19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 CYP39A1Q9NYL5 469 aa19.93■□□□□ 0.78
CHCHD3-202ENST00000423635 PLIN4Q96Q06 1357 aa19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 GNAT2P19087 354 aa19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 DUSP28Q4G0W2 176 aa19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 EEPD1Q7L9B9 569 aa19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 FBXO16Q8IX29 292 aaPredicted RBP19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 KBTBD3Q8NAB2 608 aa19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 TRMT13Q9NUP7 481 aaKnown RBP19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 DDX19BQ9UMR2 479 aa19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 DDX49Q9Y6V7 483 aaKnown RBP19.92■□□□□ 0.78
CHCHD3-202ENST00000423635 EPOPA6NHQ4 379 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 PATL2C9JE40 543 aaKnown RBP19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 CYP2C9P11712 490 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 ALAS1P13196 640 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 RFC2P35250 354 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 SLC9A7Q96T83 725 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 POLR3EQ9NVU0 708 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 TNKSO95271 1327 aa19.91■□□□□ 0.78
CHCHD3-202ENST00000423635 GPAA1O43292 621 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 TSPY3P0CV98 308 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 TSPY8P0CW00 308 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 ACTN1P12814 892 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 SLC1A4P43007 532 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 TDO2P48775 406 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 MUM1L1Q5H9M0 696 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 DEFB128Q7Z7B8 93 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 LRRCC1Q9C099 1032 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 CERS4Q9HA82 394 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 ECHDC1Q9NTX5 307 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 HCN4Q9Y3Q4 1203 aa19.9■□□□□ 0.78
CHCHD3-202ENST00000423635 RNF113AO15541 343 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms