RNA–Protein interactions for RNA: ENST00000423494.6

LRTOMT-205, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 1,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-205ENST00000423494 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 FAM126BQ8IXS8 530 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 FAM133AQ8N9E0 248 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 PRUNE2Q8WUY3 3088 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 MSRAQ9UJ68 235 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
LRTOMT-205ENST00000423494 CDH23Q9H251 3354 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 DYNC1LI2O43237 492 aaPredicted RBP13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 FGBP02675 491 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 SNAP25P60880 206 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 TLK2Q86UE8 772 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 KATNBL1Q9H079 304 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
LRTOMT-205ENST00000423494 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 CTAGE5O15320 804 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 CD4P01730 458 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 RAB30Q15771 203 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 FSCN1Q16658 493 aaKnown RBP13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 PRDM6Q9NQX0 595 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 ZNF536O15090 1300 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 VCANP13611 3396 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 PLIN4Q96Q06 1357 aa13.07□□□□□ -0.32
LRTOMT-205ENST00000423494 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 PLA2G6O60733 806 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 SMPD1P17405 629 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 IGFBP4P22692 258 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 CCL23P55773 120 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 NKX3-2P78367 333 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 CCDC96Q2M329 555 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 OTOP2Q7RTS6 562 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 RPUSD2Q8IZ73 545 aaKnown RBP13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 HERVK_113Q902F9 699 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 SLC28A3Q9HAS3 691 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 PDGFCQ9NRA1 345 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 CCPG1Q9ULG6 757 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 GNEQ9Y223 722 aaKnown RBP13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 ASTN1O14525 1302 aa13.06□□□□□ -0.32
LRTOMT-205ENST00000423494 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 MUM1L1Q5H9M0 696 aa13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 SEZ6LQ9BYH1 1024 aa13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
LRTOMT-205ENST00000423494 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 ZBBXA8MT70 800 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 B4GALT4O60513 344 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 NMT2O60551 498 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 PSMC6P62333 389 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 TAPT1Q6NXT6 567 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 TRPV6Q9H1D0 765 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 VTA1Q9NP79 307 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 CYP39A1Q9NYL5 469 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 CXXC1Q9P0U4 656 aaPredicted RBP13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 Q9Y3F1 56 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 UMODL1Q5DID0 1318 aa13.04□□□□□ -0.32
LRTOMT-205ENST00000423494 ICAM1P05362 532 aa13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 MX1P20591 662 aa13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 PTGS1P23219 599 aa13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 BAATQ14032 418 aaPredicted RBP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 ATXN2LQ8WWM7 1075 aaKnown RBP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 POLR3EQ9NVU0 708 aa13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRTOMT-205ENST00000423494 GRIN2DO15399 1336 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms