RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 GFRA3O60609 400 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ATP2A2P16615 1042 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 GNAQP50148 359 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ZBTB8OSQ8IWT0 167 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 THEM5Q8N1Q8 247 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ZNF296Q8WUU4 475 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 BBXQ8WY36 941 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 NAP1L4Q99733 375 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 RIOK1Q9BRS2 568 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 MRPL11Q9Y3B7 192 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 KDM3BQ7LBC6 1761 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 MAGEB6P1A0A0J9YX57 407 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ZSCAN5CA6NGD5 496 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 OFD1O75665 1012 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 CYBBP04839 570 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 IGBP1P78318 339 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 BFSP1Q12934 665 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 KRT33BQ14525 404 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 ENOX2Q16206 610 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 CDHR1Q96JP9 859 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 TTC12Q9H892 705 aaPredicted RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 VAT1LQ9HCJ6 419 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.01□□□□□ -1.777e-12■■■■■ 26.8
TOP2A-201ENST00000423485 AKT3Q9Y243 479 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 NCKAP1Q9Y2A7 1128 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 FMN2Q9NZ56 1722 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 DCCP43146 1447 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 NCAPD2Q15021 1401 aa4.01□□□□□ -1.77
TOP2A-201ENST00000423485 CHD2O14647 1828 aaKnown RBP4.01□□□□□ -1.77
TOP2A-201ENST00000423485 SYNCRIPO60506 623 aaKnown RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 MAGEC1O60732 1142 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 GNAI2P04899 355 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 KRT19P08727 400 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 FDX1P10109 184 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 ALPPL2P10696 532 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 AKR1A1P14550 325 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 KLRC2P26717 231 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 RBMS1P29558 406 aaKnown RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 HOXC9P31274 260 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 KCNV1Q6PIU1 500 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 TMEM57Q8N5G2 664 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 ANKLE1Q8NAG6 615 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 EXOC6Q8TAG9 804 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 GPKOWQ92917 476 aaPredicted RBP eCLIP4□□□□□ -1.772e-7■□□□□ 9.9
TOP2A-201ENST00000423485 RILPL2Q969X0 211 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 GAD1Q99259 594 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 C14orf93Q9H972 538 aaKnown RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 MCM9Q9NXL9 1143 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 SEPT10Q9P0V9 454 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 TJP1Q07157 1748 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 NHSQ6T4R5 1651 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 F8W8V4 182 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PRRG1O14668 218 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PDE6CP51160 858 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PER3P56645 1201 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 RESTQ13127 1097 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 EID3Q8N140 333 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 ALS2CR12Q96Q35 445 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PPP1R9BQ96SB3 815 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PARP2Q9UGN5 583 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CXCL11O14625 94 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 SYPP08247 313 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CLTBP09497 229 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CT47B1P0C2W7 299 aaPredicted RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 HTRA3P83110 453 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CDC42EP1Q00587 391 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 DSTYKQ6XUX3 929 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CATIPQ7Z7H3 387 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 ANKRD13CQ8N6S4 541 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 MSANTD4Q8NCY6 345 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PARD3BQ8TEW8 1205 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 DPF2Q92785 391 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 APBB2Q92870 758 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC114Q96M63 670 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 DCBLD2Q96PD2 775 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 INHAP05111 366 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PTPREP23469 700 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 RTP1P59025 263 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 STRN3Q13033 797 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 HHIPL2Q6UWX4 724 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 MIGA2Q7L4E1 593 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 HPS3Q969F9 1004 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 FAM212AQ96EL1 285 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 NACC1Q96RE7 527 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 TSPYL1Q9H0U9 437 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 GINM1Q9NU53 330 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 KIF1AQ12756 1690 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 SOS1Q07889 1333 aaPredicted RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 DDX11L8A8MPP1 907 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 PSMD14O00487 310 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 SLC1A4P43007 532 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CCT4P50991 539 aaKnown RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 SLC20A2Q08357 652 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 KCNH2Q12809 1159 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC149Q6ZUS6 474 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 NDUFAF2Q8N183 169 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 U2AF1L4Q8WU68 220 aaKnown RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 SCFD1Q8WVM8 642 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC127Q96BQ5 260 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms