RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 KCNH5Q8NCM2 988 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 PUS7Q96PZ0 661 aaKnown RBP7.77□□□□□ -1.17
LINC00458-201ENST00000423442 DIRC2Q96SL1 478 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 KCNK12Q9HB15 430 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 CYP8B1Q9UNU6 501 aa7.77□□□□□ -1.17
LINC00458-201ENST00000423442 COL18A1P39060 1754 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 KTN1Q86UP2 1357 aaKnown RBP7.76□□□□□ -1.17
LINC00458-201ENST00000423442 EXOC5O00471 708 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 C1QTNF9P0C862 333 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 HSPA6P17066 643 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 CDK8P49336 464 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 ZNF827Q17R98 1081 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.76□□□□□ -1.17
LINC00458-201ENST00000423442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC00458-201ENST00000423442 NLGN2Q8NFZ4 835 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 SRCIN1Q9C0H9 1055 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 WWC3Q9ULE0 1092 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 ST14Q9Y5Y6 855 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 CAPN6Q9Y6Q1 641 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 PAPPAQ13219 1627 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 RGPD5Q99666 1765 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 WDR17Q8IZU2 1322 aa7.76□□□□□ -1.17
LINC00458-201ENST00000423442 CBX7O95931 251 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 POLD1P28340 1107 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 C22orf34Q6ZV56 151 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 ZSCAN18Q8TBC5 510 aaPredicted RBP7.75□□□□□ -1.17
LINC00458-201ENST00000423442 SLC12A5Q9H2X9 1139 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 NSUN3Q9H649 340 aaKnown RBP7.75□□□□□ -1.17
LINC00458-201ENST00000423442 NHSQ6T4R5 1651 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 ATP10DQ9P241 1426 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 TTC21AQ8NDW8 1320 aa7.75□□□□□ -1.17
LINC00458-201ENST00000423442 SLIT3O75094 1523 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 ETF1P62495 437 aaKnown RBP7.74□□□□□ -1.17
LINC00458-201ENST00000423442 SCARA3Q6AZY7 606 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 HDXQ7Z353 690 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 FBF1Q8TES7 1133 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 XAGE3Q8WTP9 111 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 UBE2FQ969M7 185 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 COL24A1Q17RW2 1714 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 TTC21BQ7Z4L5 1316 aa7.74□□□□□ -1.17
LINC00458-201ENST00000423442 SBNO2Q9Y2G9 1366 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 ZSCAN22P10073 491 aaPredicted RBP7.73□□□□□ -1.17
LINC00458-201ENST00000423442 LETMD1Q6P1Q0 360 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 MFSD2AQ8NA29 543 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 ZNF526Q8TF50 670 aaPredicted RBP7.73□□□□□ -1.17
LINC00458-201ENST00000423442 GAL3ST3Q96A11 431 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 ZSWIM5Q9P217 1185 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 GNEQ9Y223 722 aaKnown RBP7.73□□□□□ -1.17
LINC00458-201ENST00000423442 BTAF1O14981 1849 aa7.73□□□□□ -1.17
LINC00458-201ENST00000423442 USP6P35125 1406 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 CAP2P40123 477 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
LINC00458-201ENST00000423442 PRAMEF13Q5VWM6 474 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 FBXO15Q8NCQ5 510 aaPredicted RBP7.72□□□□□ -1.17
LINC00458-201ENST00000423442 ANKRD24Q8TF21 1146 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 ALPK1Q96QP1 1244 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 POLR3GLQ9BT43 218 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 SLAMF8Q9P0V8 285 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 PNPLA7Q6ZV29 1317 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 QSER1Q2KHR3 1735 aa7.72□□□□□ -1.17
LINC00458-201ENST00000423442 TNS2Q63HR2 1409 aa7.71□□□□□ -1.17
LINC00458-201ENST00000423442 KAT6BQ8WYB5 2073 aa7.71□□□□□ -1.17
LINC00458-201ENST00000423442 NFIBO00712 420 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 USP17L7P0C7H9 530 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 FMR1Q06787 632 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00458-201ENST00000423442 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 ARHGEF25Q86VW2 580 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 HID1Q8IV36 788 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 COG3Q96JB2 828 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 TUBGCP6Q96RT7 1819 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 CCDC7Q96M83 1385 aa7.71□□□□□ -1.18
LINC00458-201ENST00000423442 CPSF1Q10570 1443 aaKnown RBP7.7□□□□□ -1.18
LINC00458-201ENST00000423442 PIK3C2AO00443 1686 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 DNAJC25-GNG10A0A024R161 153 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 GIPC1O14908 333 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 ERVFC1P60507 584 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 TNK2Q07912 1038 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 PDE4CQ08493 712 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 ALG1LQ6GMV1 187 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 THAP5Q7Z6K1 395 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 CDH24Q86UP0 819 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 SIAH1Q8IUQ4 282 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 TESK2Q96S53 571 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 C12orf49Q9H741 205 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 TFCP2L1Q9NZI6 479 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 USP47Q96K76 1375 aa7.7□□□□□ -1.18
LINC00458-201ENST00000423442 WASH4PA8MWX3 477 aa7.69□□□□□ -1.18
LINC00458-201ENST00000423442 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
LINC00458-201ENST00000423442 CST3P01034 146 aaPredicted RBP7.69□□□□□ -1.18
LINC00458-201ENST00000423442 GRK4P32298 578 aa7.69□□□□□ -1.18
LINC00458-201ENST00000423442 AMPHP49418 695 aa7.69□□□□□ -1.18
LINC00458-201ENST00000423442 LILRA6Q6PI73 481 aa7.69□□□□□ -1.18
LINC00458-201ENST00000423442 NME9Q86XW9 330 aa7.69□□□□□ -1.18
LINC00458-201ENST00000423442 ABHD4Q8TB40 342 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms