RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 VSIG1Q86XK7 387 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 PPM1KQ8N3J5 372 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 FERMT1Q9BQL6 677 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 SPTLC3Q9NUV7 552 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 PCDHA1Q9Y5I3 950 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 C1orf167Q5SNV9 1468 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 LRRC37A3O60309 1634 aa11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 TRPM3Q9HCF6 1732 aaPredicted RBP11.71□□□□□ -0.54
SEMA4D-208ENST00000422704 GAS7O60861 476 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 STAT1P42224 750 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 GNGT1P63211 74 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 ADAM9Q13443 819 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 IFNAR2P48551 515 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 COPB1P53618 953 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 HLFQ16534 295 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 GBP6Q6ZN66 633 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 FAM169AQ9Y6X4 670 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 CRB1P82279 1406 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 DNM2P50570 870 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 FAM26FQ5R3K3 315 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 PHLDB2Q86SQ0 1253 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 KRIT1O00522 736 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 CTNNA1P35221 906 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 GABPB1Q06547 395 aaPredicted RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 RASGRF1Q13972 1273 aa11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 MAK16Q9BXY0 300 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
SEMA4D-208ENST00000422704 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 LRRN2O75325 713 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 RESTQ13127 1097 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 TRPC3Q13507 836 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 UBE3CQ15386 1083 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 ARHGEF10LQ9HCE6 1279 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 STK38LQ9Y2H1 464 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 CLIC2O15247 247 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 TUBB4BP68371 445 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 PAK2Q13177 524 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 VWA3BQ502W6 1294 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 FMNL3Q8IVF7 1028 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 TTC14Q96N46 770 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 TOB2Q14106 344 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 PPP2R5BQ15173 497 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 SUGCTQ9HAC7 445 aa11.69□□□□□ -0.54
SEMA4D-208ENST00000422704 TMEM232C9JQI7 657 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 H7C1D1 291 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 CALUO43852 315 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 ADD2P35612 726 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 ZNF131P52739 623 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 CASC4Q6P4E1 433 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 MARCH10Q8NA82 808 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 EFCAB8A8MWE9 144 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 FERP16591 822 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 SNAP25P60880 206 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 SLC7A5Q01650 507 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 CTAGE3PQ8IX95 158 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 LRRC45Q96CN5 670 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 ARPP21Q9UBL0 812 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 GDAQ9Y2T3 454 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 CYP27B1O15528 508 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 MCAMP43121 646 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 CCT5P48643 541 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 CACNB3P54284 484 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 NLRP10Q86W26 655 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 STMN4Q9H169 189 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 PANK4Q9NVE7 773 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 POLR3EQ9NVU0 708 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 MAN1B1Q9UKM7 699 aa11.68□□□□□ -0.54
SEMA4D-208ENST00000422704 NOP56O00567 594 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 FTCDO95954 541 aa11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 PPFIA1Q13136 1202 aa11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 UBL4BQ8N7F7 174 aa11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 ARHGEF2Q92974 986 aaKnown RBP11.67□□□□□ -0.54
SEMA4D-208ENST00000422704 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms