RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 PRAMEF22A3QJZ6 481 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 SPDYE3A6NKU9 549 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 BTBD11A6QL63 1104 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 F13A1P00488 732 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 HMGB1P09429 215 aaKnown RBP6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 SNRPA1P09661 255 aaKnown RBP6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 SPATA31C1P0DKV0 1188 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 NME2P22392 152 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 MAP2K2P36507 400 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 ETFBP38117 255 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 ECE1P42892 770 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 PPP2R3AQ06190 1150 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 HLFQ16534 295 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 PERM1Q5SV97 790 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 SCARA3Q6AZY7 606 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 TTC9Q92623 222 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 NKD1Q969G9 470 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 GAL3ST3Q96A11 431 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 SHDQ96IW2 340 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 PHACTR3Q96KR7 559 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 CAPNS2Q96L46 248 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 PLVAPQ9BX97 442 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 PGAP2Q9UHJ9 254 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 CYP8B1Q9UNU6 501 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 NIP7Q9Y221 180 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 SAMM50Q9Y512 469 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 PCDHB5Q9Y5E4 795 aa6.11□□□□□ -1.43
CDC42EP3-202ENST00000422687 ABCC12Q96J65 1359 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 ERVV-1B6SEH8 477 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 NPHP1O15259 732 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 CA12O43570 354 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 CILPO75339 1184 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 ESRRAP11474 423 aaPredicted RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 PTPRAP18433 802 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 EPS15P42566 896 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 PIP4K2AP48426 406 aaPredicted RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 MPP2Q14168 576 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 CEP135Q66GS9 1140 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 BNC2Q6ZN30 1099 aaPredicted RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 USP50Q70EL3 339 aaPredicted RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 FAM35AQ86V20 835 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 FBXO27Q8NI29 283 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 STK35Q8TDR2 534 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 JDP2Q8WYK2 163 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 GPR101Q96P66 508 aaPredicted RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 LPIN3Q9BQK8 851 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 VPS33BQ9H267 617 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 CACNA2D2Q9NY47 1150 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 PRKAG3Q9UGI9 489 aa6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 ABT1Q9ULW3 272 aaKnown RBP6.1□□□□□ -1.43
CDC42EP3-202ENST00000422687 CACNA1SQ13698 1873 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 PDE4DIPQ5VU43 2346 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 K7ELQ4 463 aaPredicted RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 U2SURPO15042 1029 aaKnown RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 HTATSF1O43719 755 aaKnown RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 CPB1P15086 417 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 PRKAR2BP31323 418 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 EIF6P56537 245 aaKnown RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 RAB33AQ14088 237 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 BMS1Q14692 1282 aaKnown RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 NFE2L2Q16236 605 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 SDE2Q6IQ49 451 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 CYP4F22Q6NT55 531 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 ANKS3Q6ZW76 656 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 SAPCD2Q86UD0 394 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 PDZD3Q86UT5 571 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 SULF2Q8IWU5 870 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 REXO1Q8N1G1 1221 aaKnown RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 PSMG3-AS1Q96PY0 264 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 CRAMP1Q96RY5 1269 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 RTFDC1Q9BY42 306 aaPredicted RBP6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 NYXQ9GZU5 481 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 MIR1-1HGQ9H1L0 117 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 IGFLR1Q9H665 355 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 SIRPGQ9P1W8 387 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 TRIM33Q9UPN9 1127 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 MRVI1Q9Y6F6 885 aa6.09□□□□□ -1.43
CDC42EP3-202ENST00000422687 CDHR2Q9BYE9 1310 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 C1QTNF9BB2RNN3 333 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 TRAF5O00463 557 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 LILRB5O75023 590 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 ADAM23O75077 832 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 ARNTP27540 789 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 CHRNA4P43681 627 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 GIPRP48546 466 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 ZNF157P51786 506 aaPredicted RBP6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 TBC1D8BQ0IIM8 1120 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 LRRC14Q15048 493 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 CC2D1BQ5T0F9 858 aaKnown RBP6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 LLGL2Q6P1M3 1020 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 LRP10Q7Z4F1 713 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 SLC51AQ86UW1 340 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 CD163Q86VB7 1156 aa6.08□□□□□ -1.44
CDC42EP3-202ENST00000422687 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms