RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 SHCBP1Q8NEM2 672 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 COA7Q96BR5 231 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 MTMR8Q96EF0 704 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 TRERF1Q96PN7 1200 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 SPZ1Q9BXG8 430 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 MROH8Q9H579 483 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 NCOA5Q9HCD5 579 aaKnown RBP10.76□□□□□ -0.69
PDGFC-202ENST00000422544 RLFQ13129 1914 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 PNMA6FA0A0J9YX94 578 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 ZBTB5O15062 677 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 PPP1R11O60927 126 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-202ENST00000422544 PPFIA3O75145 1194 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 PTPREP23469 700 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 HOXD10P28358 340 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 COPB2P35606 906 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 PRKCZQ05513 592 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 FUT2Q10981 343 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 PPP2R5BQ15173 497 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 ME3Q16798 604 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 USH1GQ495M9 461 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 FBXO11Q86XK2 927 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 RRP36Q96EU6 259 aaKnown RBP10.75□□□□□ -0.69
PDGFC-202ENST00000422544 SLKQ9H2G2 1235 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-202ENST00000422544 RNF146Q9NTX7 359 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 SRRDQ9UH36 339 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 GJD2Q9UKL4 321 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 GABRQQ9UN88 632 aa10.75□□□□□ -0.69
PDGFC-202ENST00000422544 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-202ENST00000422544 PFKFB2O60825 505 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 LARGE1O95461 756 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 GNRH1P01148 92 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 FCER1AP12319 257 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 FLT3LGP49771 235 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 SCRN1Q12765 414 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 PKN2Q16513 984 aaKnown RBP10.74□□□□□ -0.69
PDGFC-202ENST00000422544 TKFCQ3LXA3 575 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 MUM1L1Q5H9M0 696 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 CHST13Q8NET6 341 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 CLEC4DQ8WXI8 215 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 MMP19Q99542 508 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 AMNQ9BXJ7 453 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 SEC63Q9UGP8 760 aaKnown RBP10.74□□□□□ -0.69
PDGFC-202ENST00000422544 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 IVNS1ABPQ9Y6Y0 642 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 ALPK3Q96L96 1907 aa10.74□□□□□ -0.69
PDGFC-202ENST00000422544 PRUNE2Q8WUY3 3088 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 SLC15A5A6NIM6 579 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 CPLX1O14810 134 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 STRNO43815 780 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 ST18O60284 1047 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 DTNBO60941 627 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 COBLO75128 1261 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 CYP2B6P20813 491 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 ADORA2AP29274 412 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 GRB14Q14449 540 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 KCTD2Q14681 263 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 NTRK3Q16288 839 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 MORN1Q5T089 497 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 ANKRD35Q8N283 1001 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 PHKBQ93100 1093 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 NUDT12Q9BQG2 462 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 ACAD9Q9H845 621 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 PTPN22Q9Y2R2 807 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 PCDHA1Q9Y5I3 950 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 CNTNAP5Q8WYK1 1306 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 NID2Q14112 1375 aa10.73□□□□□ -0.69
PDGFC-202ENST00000422544 NFIBO00712 420 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
PDGFC-202ENST00000422544 PGK2P07205 417 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 IFNAR1P17181 557 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 EN2P19622 333 aaPredicted RBP10.72□□□□□ -0.69
PDGFC-202ENST00000422544 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 DPP9Q86TI2 863 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 ABRAQ8N0Z2 381 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 RAET1EQ8TD07 263 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 SOCS4Q8WXH5 440 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 TBC1D5Q92609 795 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 USP6NLQ92738 828 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 SLC26A6Q9BXS9 759 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 A1CFQ9NQ94 594 aaKnown RBP10.72□□□□□ -0.69
PDGFC-202ENST00000422544 COLQQ9Y215 455 aaPredicted RBP10.72□□□□□ -0.69
PDGFC-202ENST00000422544 MRPL11Q9Y3B7 192 aaKnown RBP10.72□□□□□ -0.69
PDGFC-202ENST00000422544 PTCH2Q9Y6C5 1203 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 ABCB11O95342 1321 aa10.72□□□□□ -0.69
PDGFC-202ENST00000422544 BAZ2BQ9UIF8 2168 aaKnown RBP10.72□□□□□ -0.69
PDGFC-202ENST00000422544 PRPF3O43395 683 aaKnown RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 CTDNEP1O95476 244 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 RGS2P41220 211 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 PRMT2P55345 433 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 AKAP17AQ02040 695 aaKnown RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 SSRP1Q08945 709 aaKnown RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 TRAF1Q13077 416 aa10.71□□□□□ -0.69
PDGFC-202ENST00000422544 BAATQ14032 418 aaPredicted RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 CPLX2Q6PUV4 134 aaKnown RBP10.71□□□□□ -0.69
PDGFC-202ENST00000422544 HEATR3Q7Z4Q2 680 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms