RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 TMOD4Q9NZQ9 345 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PCDHA6Q9UN73 950 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 RIPK3Q9Y572 518 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PCDHA8Q9Y5H6 950 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
HPS4-204ENST00000422379 HTTP42858 3142 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 DSG3P32926 999 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 KRT2P35908 639 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 TMEM132BQ14DG7 1078 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 USP17L6PQ6QN14 398 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 PANK2Q9BZ23 570 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
HPS4-204ENST00000422379 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
HPS4-204ENST00000422379 CLIC4Q9Y696 253 aa10.28□□□□□ -0.76
HPS4-204ENST00000422379 ESYT2A0FGR8 921 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 UNCXA6NJT0 531 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 MEIS2O14770 477 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 CLK2P49760 499 aaKnown RBP10.27□□□□□ -0.76
HPS4-204ENST00000422379 CEBPZQ03701 1054 aaKnown RBP10.27□□□□□ -0.76
HPS4-204ENST00000422379 MUM1L1Q5H9M0 696 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 CPXCR1Q8N123 301 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.76
HPS4-204ENST00000422379 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 ZIC5Q96T25 663 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 AMNQ9BXJ7 453 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 ASCC2Q9H1I8 757 aaPredicted RBP10.27□□□□□ -0.76
HPS4-204ENST00000422379 BTBD7Q9P203 1132 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.76
HPS4-204ENST00000422379 AGTPBP1Q9UPW5 1226 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 MRVI1Q9Y6F6 885 aa10.27□□□□□ -0.76
HPS4-204ENST00000422379 COL11A1P12107 1806 aaPredicted RBP10.27□□□□□ -0.77
HPS4-204ENST00000422379 FAM155AB1AL88 458 aaPredicted RBP10.27□□□□□ -0.77
HPS4-204ENST00000422379 NFIBO00712 420 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 CNMDO75829 334 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 TOMM70O94826 608 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 ICAM1P05362 532 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 HOXA7P31268 230 aaPredicted RBP10.27□□□□□ -0.77
HPS4-204ENST00000422379 SNAPC2Q13487 334 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 COG2Q14746 738 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 JAKMIP3Q5VZ66 844 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 PIK3AP1Q6ZUJ8 805 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 BRAPQ7Z569 592 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 TXNRD2Q9NNW7 524 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 RIC8AQ9NPQ8 531 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 PCDHB6Q9Y5E3 794 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 A0A0G2JMZ2 1700 aa10.27□□□□□ -0.77
HPS4-204ENST00000422379 BTBD19C9JJ37 291 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 CYP2C8P10632 490 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 XBP1P17861 261 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 HOXA13P31271 388 aaPredicted RBP10.26□□□□□ -0.77
HPS4-204ENST00000422379 ADCY7P51828 1080 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 UBE2HP62256 183 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
HPS4-204ENST00000422379 PPP1R18Q6NYC8 613 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 FAM43AQ8N2R8 423 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 CCDC148Q8NFR7 591 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 LEO1Q8WVC0 666 aaPredicted RBP10.26□□□□□ -0.77
HPS4-204ENST00000422379 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 HOMER2Q9NSB8 354 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 CCPG1Q9ULG6 757 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
HPS4-204ENST00000422379 CCL15-CCL14A0A0B4J2E2 113 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 SYCE3A1L190 88 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 hCG_1984214I3L0E3 225 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 CALML3P27482 149 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 ZNF157P51786 506 aaPredicted RBP10.25□□□□□ -0.77
HPS4-204ENST00000422379 KRT85P78386 507 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 PTPAQ15257 358 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 CCL15Q16663 113 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 LBX2Q6XYB7 198 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 ZNF713Q8N859 430 aaPredicted RBP10.25□□□□□ -0.77
HPS4-204ENST00000422379 PURBQ96QR8 312 aaKnown RBP10.25□□□□□ -0.77
HPS4-204ENST00000422379 COL20A1Q9P218 1284 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 ZBTB48P10074 688 aaPredicted RBP10.25□□□□□ -0.77
HPS4-204ENST00000422379 ATP2B1P20020 1258 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 HERVK_113P62684 666 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 INF2Q27J81 1249 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 REXO1Q8N1G1 1221 aaKnown RBP10.25□□□□□ -0.77
HPS4-204ENST00000422379 C6orf50Q9HD87 102 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 RBPJLQ9UBG7 517 aa10.25□□□□□ -0.77
HPS4-204ENST00000422379 MYPNQ86TC9 1320 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 IGF2BP3O00425 579 aaKnown RBP eCLIP10.24□□□□□ -0.77
HPS4-204ENST00000422379 SLC10A3P09131 477 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 ALAS1P13196 640 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 GNA11P29992 359 aa10.24□□□□□ -0.77
HPS4-204ENST00000422379 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
HPS4-204ENST00000422379 GRIN1Q05586 938 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms