RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 WWC1Q8IX03 1113 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 C17orf80Q9BSJ5 609 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 USP44Q9H0E7 712 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 ADAMTS5Q9UNA0 930 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 IL16Q14005 1332 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 DMDP11532 3685 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 PARP14Q460N5 1801 aa14.57□□□□□ -0.08
UFD1-203ENST00000421968 DNAJC25-GNG10A0A024R161 153 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 GJB5O95377 273 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 SHMT1P34896 483 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 NUBP1P53384 320 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 ARMCX2Q7L311 632 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 FRMD5Q7Z6J6 570 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 RPAINQ86UA6 219 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.56□□□□□ -0.08
UFD1-203ENST00000421968 ZNF214Q9UL59 606 aaPredicted RBP14.56□□□□□ -0.08
UFD1-203ENST00000421968 PA2G4Q9UQ80 394 aaKnown RBP14.56□□□□□ -0.08
UFD1-203ENST00000421968 CEP250Q9BV73 2442 aa14.56□□□□□ -0.08
UFD1-203ENST00000421968 CFAP47Q6ZTR5 3102 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 VPS13AQ96RL7 3174 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 VWA5AO00534 786 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
UFD1-203ENST00000421968 LTBRP36941 435 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 USP5P45974 858 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 DYNLL1P63167 89 aaKnown RBP14.55□□□□□ -0.08
UFD1-203ENST00000421968 GORABQ5T7V8 394 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 FAM117BQ6P1L5 589 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 TTC6Q86TZ1 520 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 NEUROD6Q96NK8 337 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 NSUN3Q9H649 340 aaKnown RBP14.55□□□□□ -0.08
UFD1-203ENST00000421968 FBXO28Q9NVF7 368 aa14.55□□□□□ -0.08
UFD1-203ENST00000421968 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
UFD1-203ENST00000421968 WDR46O15213 610 aaKnown RBP14.54□□□□□ -0.08
UFD1-203ENST00000421968 NCK2O43639 380 aa14.54□□□□□ -0.08
UFD1-203ENST00000421968 SMAD4Q13485 552 aaKnown RBP14.54□□□□□ -0.08
UFD1-203ENST00000421968 ASIC4Q96FT7 647 aa14.54□□□□□ -0.08
UFD1-203ENST00000421968 GNEQ9Y223 722 aaKnown RBP14.54□□□□□ -0.08
UFD1-203ENST00000421968 AKAP2Q9Y2D5 859 aa14.54□□□□□ -0.08
UFD1-203ENST00000421968 TANC1Q9C0D5 1861 aa14.54□□□□□ -0.08
UFD1-203ENST00000421968 ANKRD11Q6UB99 2663 aaPredicted RBP14.54□□□□□ -0.08
UFD1-203ENST00000421968 DMXL1Q9Y485 3027 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 PTGS1P23219 599 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 DLX2Q07687 328 aaPredicted RBP14.53□□□□□ -0.08
UFD1-203ENST00000421968 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
UFD1-203ENST00000421968 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 CCDC144CPQ8IYA2 1237 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 KATNBL1Q9H079 304 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 VCPKMTQ9H867 229 aa14.53□□□□□ -0.08
UFD1-203ENST00000421968 TRIP12Q14669 1992 aaPredicted RBP14.53□□□□□ -0.08
UFD1-203ENST00000421968 FASNP49327 2511 aaKnown RBP14.52□□□□□ -0.08
UFD1-203ENST00000421968 DNAH14Q0VDD8 3507 aa14.52□□□□□ -0.08
UFD1-203ENST00000421968 ARID4AP29374 1257 aaPredicted RBP14.52□□□□□ -0.09
UFD1-203ENST00000421968 MCAMP43121 646 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 BFSP2Q13515 415 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 PUM1Q14671 1186 aaKnown RBP eCLIP14.52□□□□□ -0.09
UFD1-203ENST00000421968 ST3GAL2Q16842 350 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 FAM47CQ5HY64 1035 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 SNRNP48Q6IEG0 339 aaKnown RBP14.52□□□□□ -0.09
UFD1-203ENST00000421968 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 FGD4Q96M96 766 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 ARHGEF10LQ9HCE6 1279 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.09
UFD1-203ENST00000421968 SMPD1P17405 629 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 PLCD1P51178 756 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 TFCP2Q12800 502 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 GPM6BQ13491 265 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 EPC2Q52LR7 807 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 SH2D4AQ9H788 454 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 TMX2Q9Y320 296 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 RIPK3Q9Y572 518 aa14.51□□□□□ -0.09
UFD1-203ENST00000421968 FAM208BQ5VWN6 2430 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 H3BNC9 293 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 CTC1Q2NKJ3 1217 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 CLEC10AQ8IUN9 316 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 ANKRD35Q8N283 1001 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 SNRKQ9NRH2 765 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 CD207Q9UJ71 328 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 INSL6Q9Y581 213 aa14.5□□□□□ -0.09
UFD1-203ENST00000421968 LOC730098B7Z3J9 87 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 PDGFBP01127 241 aaPredicted RBP14.49□□□□□ -0.09
UFD1-203ENST00000421968 LRRFIP1Q32MZ4 808 aaKnown RBP14.49□□□□□ -0.09
UFD1-203ENST00000421968 CNKSR3Q6P9H4 555 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 TMEM179Q6ZVK1 233 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 SIAH1Q8IUQ4 282 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 SAMD11Q96NU1 681 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 COPRSQ9NQ92 184 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 NOD1Q9Y239 953 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 USP24Q9UPU5 2620 aa14.49□□□□□ -0.09
UFD1-203ENST00000421968 ABHD14A-ACY1A0A1B0GW23 586 aa14.48□□□□□ -0.09
UFD1-203ENST00000421968 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
UFD1-203ENST00000421968 UQCRFS1P1P0C7P4 283 aa14.48□□□□□ -0.09
UFD1-203ENST00000421968 ICA1Q05084 483 aa14.48□□□□□ -0.09
UFD1-203ENST00000421968 MIGA1Q8NAN2 632 aa14.48□□□□□ -0.09
UFD1-203ENST00000421968 PPP1R13LQ8WUF5 828 aa14.48□□□□□ -0.09
UFD1-203ENST00000421968 POLR3EQ9NVU0 708 aa14.48□□□□□ -0.09
UFD1-203ENST00000421968 RAD21O60216 631 aa14.47□□□□□ -0.09
UFD1-203ENST00000421968 TBX10O75333 385 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms