RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ORC3Q9UBD5 711 aaPredicted RBP20.25■□□□□ 0.83
LINC00271-201ENST00000421378 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
LINC00271-201ENST00000421378 ABCB11O95342 1321 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
LINC00271-201ENST00000421378 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
LINC00271-201ENST00000421378 HMGN5P82970 282 aaKnown RBP20.24■□□□□ 0.83
LINC00271-201ENST00000421378 WWC2Q6AWC2 1192 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 SMARCC2Q8TAQ2 1214 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 ZNF296Q8WUU4 475 aaPredicted RBP20.24■□□□□ 0.83
LINC00271-201ENST00000421378 COA7Q96BR5 231 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 ACAD9Q9H845 621 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
LINC00271-201ENST00000421378 FBXO40Q9UH90 709 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 SMCHD1A6NHR9 2005 aa20.24■□□□□ 0.83
LINC00271-201ENST00000421378 FKTNO75072 461 aa20.23■□□□□ 0.83
LINC00271-201ENST00000421378 ECM2O94769 699 aaPredicted RBP20.23■□□□□ 0.83
LINC00271-201ENST00000421378 KIF22Q14807 665 aa20.23■□□□□ 0.83
LINC00271-201ENST00000421378 BARHL2Q9NY43 387 aa20.23■□□□□ 0.83
LINC00271-201ENST00000421378 MRPL11Q9Y3B7 192 aaKnown RBP20.23■□□□□ 0.83
LINC00271-201ENST00000421378 FDPSP14324 419 aaKnown RBP20.22■□□□□ 0.83
LINC00271-201ENST00000421378 BECN1Q14457 450 aa20.22■□□□□ 0.83
LINC00271-201ENST00000421378 MUM1L1Q5H9M0 696 aa20.22■□□□□ 0.83
LINC00271-201ENST00000421378 GPR142Q7Z601 462 aa20.22■□□□□ 0.83
LINC00271-201ENST00000421378 WASF1Q92558 559 aa20.22■□□□□ 0.83
LINC00271-201ENST00000421378 IVNS1ABPQ9Y6Y0 642 aa20.22■□□□□ 0.83
LINC00271-201ENST00000421378 STXBP3O00186 592 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 NFIBO00712 420 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 TNPO2O14787 897 aaKnown RBP20.21■□□□□ 0.83
LINC00271-201ENST00000421378 FOXN1O15353 648 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 NAPAP54920 295 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 FCGRTP55899 365 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 PPP1R18Q6NYC8 613 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 MGAMO43451 1857 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 RBBP6Q7Z6E9 1792 aaKnown RBP20.21■□□□□ 0.83
LINC00271-201ENST00000421378 HSP90AA1P07900 732 aaKnown RBP20.21■□□□□ 0.83
LINC00271-201ENST00000421378 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
LINC00271-201ENST00000421378 PSMC4P43686 418 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 TYW1BQ6NUM6 668 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 FAM184AQ8NB25 1140 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 CCDC12Q8WUD4 166 aaPredicted RBP20.21■□□□□ 0.83
LINC00271-201ENST00000421378 CLEC4DQ8WXI8 215 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 ERO1AQ96HE7 468 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 INTS4Q96HW7 963 aaKnown RBP20.21■□□□□ 0.83
LINC00271-201ENST00000421378 AIFM3Q96NN9 605 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 SMC3Q9UQE7 1217 aa20.21■□□□□ 0.83
LINC00271-201ENST00000421378 ZSWIM8A7E2V4 1837 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 PLXNB2O15031 1838 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 FCER1AP12319 257 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 CTGFP29279 349 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 KCTD2Q14681 263 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.2■□□□□ 0.82
LINC00271-201ENST00000421378 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 MCF2L2Q86YR7 1114 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 ANKRD35Q8N283 1001 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 CCDC148Q8NFR7 591 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 CD99L2Q8TCZ2 262 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 TRIM47Q96LD4 638 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 ALG1Q9BT22 464 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 VPS54Q9P1Q0 977 aa20.2■□□□□ 0.82
LINC00271-201ENST00000421378 OPLAHO14841 1288 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 STRNO43815 780 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 HSPA8P11142 646 aaKnown RBP20.19■□□□□ 0.82
LINC00271-201ENST00000421378 XBP1P17861 261 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 CTCFP49711 727 aaPredicted RBP20.19■□□□□ 0.82
LINC00271-201ENST00000421378 NSMFQ6X4W1 530 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 ABRAQ8N0Z2 381 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 MMP19Q99542 508 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 A1CFQ9NQ94 594 aaKnown RBP20.19■□□□□ 0.82
LINC00271-201ENST00000421378 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
LINC00271-201ENST00000421378 PFASO15067 1338 aa20.18■□□□□ 0.82
LINC00271-201ENST00000421378 GJB2P29033 226 aa20.18■□□□□ 0.82
LINC00271-201ENST00000421378 ZNF236Q9UL36 1845 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 CFBP00751 764 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 PTPREP23469 700 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 GRB14Q14449 540 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 RNF207Q6ZRF8 634 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 FAM177A1Q8N128 213 aaPredicted RBP20.17■□□□□ 0.82
LINC00271-201ENST00000421378 RGS22Q8NE09 1264 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 SOCS4Q8WXH5 440 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 CUL5Q93034 780 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 ZMYND12Q9H0C1 365 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 PSTPIP2Q9H939 334 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 CYP39A1Q9NYL5 469 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 SMCO2A6NFE2 343 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 ADORA2AP29274 412 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 CAP1Q01518 475 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 SHISA4Q96DD7 197 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 MAF1Q9H063 256 aa20.17■□□□□ 0.82
LINC00271-201ENST00000421378 SLC15A5A6NIM6 579 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 GNRH1P01148 92 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 ADCY7P51828 1080 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 LBX1P52954 281 aa20.16■□□□□ 0.82
LINC00271-201ENST00000421378 RPS6P62753 249 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms