RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SBK1Q52WX2 424 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 ZMYM1Q5SVZ6 1142 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 TREML2Q5T2D2 321 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 CTR9Q6PD62 1173 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 USP17L2Q6R6M4 530 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 PLEKHM2Q8IWE5 1019 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 RILPL2Q969X0 211 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 DYNLL2Q96FJ2 89 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 FEZ1Q99689 392 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 PTPN22Q9Y2R2 807 aa9.03□□□□□ -0.96
AC012560.1-202ENST00000421324 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 M0R2C6 588 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 TRAK2O60296 914 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 PSMC4P43686 418 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 GCLCP48506 637 aaPredicted RBP9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 SEPT2Q15019 361 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 SHROOM1Q2M3G4 852 aaPredicted RBP9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 TMEM179Q6ZVK1 233 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 C16orf86Q6ZW13 317 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 IFNL3Q8IZI9 196 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 MKNK2Q9HBH9 465 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 HELLSQ9NRZ9 838 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 DOCK1Q14185 1865 aa9.02□□□□□ -0.97
AC012560.1-202ENST00000421324 LAMB1P07942 1786 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 MYH1P12882 1939 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 SLC3A2P08195 630 aaKnown RBP9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 VSIG8P0DPA2 414 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 BCRP11274 1271 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 PRMT2P55345 433 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 FCGRTP55899 365 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 ZYXQ15942 572 aaKnown RBP9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 NBPF11Q86T75 865 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 ZNF444Q8N0Y2 327 aaPredicted RBP9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 ANKRD13CQ8N6S4 541 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 RNF217Q8TC41 542 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 SEC62Q99442 399 aaKnown RBP9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 NAPBQ9H115 298 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 PCDHB11Q9Y5F2 797 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 FOCADQ5VW36 1801 aa9.01□□□□□ -0.97
AC012560.1-202ENST00000421324 CDK5RAP2Q96SN8 1893 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L15C9J2P7 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L11C9JVI0 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L18D6R9N7 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L22D6RA61 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L19D6RCP7 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L20D6RJB6 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 AKR1B1P15121 316 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 GUCY1A2P33402 732 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 PTSQ03393 145 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 USP17L24Q0WX57 530 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 MCMDC2Q4G0Z9 681 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 STK11IPQ8N1F8 1099 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 ACER1Q8TDN7 264 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 IRF7Q92985 503 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 POM121Q96HA1 1249 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 C12orf42Q96LP6 360 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 P2RX7Q99572 595 aaKnown RBP9□□□□□ -0.97
AC012560.1-202ENST00000421324 ARHGAP39Q9C0H5 1083 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 SH2D4AQ9H788 454 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 KANSL2Q9H9L4 492 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
AC012560.1-202ENST00000421324 ADGRA2Q96PE1 1338 aa9□□□□□ -0.97
AC012560.1-202ENST00000421324 SMIM22K7EJ46 135 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 HIP1O00291 1037 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 TNPO2O14787 897 aaKnown RBP8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 SDSP20132 328 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 HERVK_113P62684 666 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 ATP2B2Q01814 1243 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 ICA1Q05084 483 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 PDE4BQ07343 736 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 CCDC129Q6ZRS4 1044 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 CCAR1Q8IX12 1150 aaKnown RBP8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 GPRC5AQ8NFJ5 357 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 RAET1EQ8TD07 263 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 GTF3C2Q8WUA4 911 aaPredicted RBP8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 COA7Q96BR5 231 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 DIAPH3Q9NSV4 1193 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 HOXC10Q9NYD6 342 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 SRRDQ9UH36 339 aa8.99□□□□□ -0.97
AC012560.1-202ENST00000421324 SIPA1L1O43166 1804 aa8.98□□□□□ -0.97
AC012560.1-202ENST00000421324 A0A1W2PRG0 241 aa8.98□□□□□ -0.97
AC012560.1-202ENST00000421324 A0A1W2PRU2 124 aa8.98□□□□□ -0.97
AC012560.1-202ENST00000421324 VCAM1P19320 739 aa8.98□□□□□ -0.97
AC012560.1-202ENST00000421324 GMPRP36959 345 aa8.98□□□□□ -0.97
AC012560.1-202ENST00000421324 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms