RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 CCDC129Q6ZRS4 1044 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 CALR3Q96L12 384 aaKnown RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 DEFB129Q9H1M3 183 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 DDX20Q9UHI6 824 aaKnown RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ELOA3CA0A087WX78 387 aaPredicted RBP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 ST20-MTHFSA0A0A6YYL1 179 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 ELOA3DA6NLF2 546 aaPredicted RBP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 PTCD1O75127 700 aaKnown RBP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 ELNP15502 786 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 RAG1P15918 1043 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 RASA1P20936 1047 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 ITGAEP38570 1179 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 TXLNAP40222 546 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 MTHFSP49914 203 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 ELOA3BQ3SY89 546 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 C1orf141Q5JVX7 400 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 CHSY3Q70JA7 882 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 DEPDC4Q8N2C3 294 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 ELOA3Q8NG57 546 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 LMAN2LQ9H0V9 348 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 VRTNQ9H8Y1 702 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 YBX2Q9Y2T7 364 aaKnown RBP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 MAFBQ9Y5Q3 323 aaPredicted RBP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 FAM208BQ5VWN6 2430 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 FAM196BA6NMK8 535 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 NEURL1BA8MQ27 555 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 RFC2P35250 354 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 EPHB4P54760 987 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 MOGSQ13724 837 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 PCSK7Q16549 785 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 PPM1JQ5JR12 505 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 PRAMEF18Q5VWM3 479 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 IER5Q5VY09 327 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 KIAA2013Q8IYS2 634 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 UCN2Q96RP3 112 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
CNGA1-203ENST00000420489 CPA4Q9UI42 421 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 MAPK8IP3Q9UPT6 1336 aa5.02□□□□□ -1.61
CNGA1-203ENST00000420489 BDP1A6H8Y1 2624 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 DCDC2BA2VCK2 349 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 H0Y858 1186 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 EPB42P16452 691 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 CD33P20138 364 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 ATRXP46100 2492 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 NUP98P52948 1817 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 SUZ12Q15022 739 aaKnown RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 PTPN21Q16825 1174 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 PTPROQ16827 1216 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 PLA2G4EQ3MJ16 856 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 PPP1R42Q7Z4L9 355 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 RPUSD2Q8IZ73 545 aaKnown RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 TLR9Q9NR96 1032 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 TFIP11Q9UBB9 837 aaKnown RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 TBX21Q9UL17 535 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 HCFC2Q9Y5Z7 792 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 MYO1BO43795 1136 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 DIAPH1O60610 1272 aaKnown RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 CLDN10P78369 228 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 GRB10Q13322 594 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 RRP1BQ14684 758 aaKnown RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 FKBP1CQ5VVH2 108 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 ZNF513Q8N8E2 541 aaPredicted RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 TNFRSF25Q93038 417 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 WBP1Q96G27 269 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 PPP1R12CQ9BZL4 782 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 PHACTR1Q9C0D0 580 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 SENP6Q9GZR1 1112 aaPredicted RBP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 NIP7Q9Y221 180 aaKnown RBP eCLIP5.01□□□□□ -1.61
CNGA1-203ENST00000420489 USP3Q9Y6I4 520 aa5.01□□□□□ -1.61
CNGA1-203ENST00000420489 ADAMTS20P59510 1910 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 SIP14410 1827 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 CEP290O15078 2479 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 ZKSCAN1P17029 563 aaPredicted RBP5□□□□□ -1.61
CNGA1-203ENST00000420489 CDK11BP21127 795 aaKnown RBP5□□□□□ -1.61
CNGA1-203ENST00000420489 PRRT3Q5FWE3 981 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 USHBP1Q8N6Y0 703 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 NACC1Q96RE7 527 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 ELP3Q9H9T3 547 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 MED23Q9ULK4 1368 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 EYA4O95677 639 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 ARID4AP29374 1257 aaPredicted RBP5□□□□□ -1.61
CNGA1-203ENST00000420489 DGKGP49619 791 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 RTN1Q16799 776 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 DHX37Q8IY37 1157 aaKnown RBP5□□□□□ -1.61
CNGA1-203ENST00000420489 ATP11BQ9Y2G3 1177 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 NEUROG3Q9Y4Z2 214 aa5□□□□□ -1.61
CNGA1-203ENST00000420489 LPXNO60711 386 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 FGBP02675 491 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 CANXP27824 592 aaKnown RBP4.99□□□□□ -1.61
CNGA1-203ENST00000420489 MAGEA9P43362 315 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 TNNI2P48788 182 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 PABPC4Q13310 644 aaKnown RBP eCLIP4.99□□□□□ -1.61
CNGA1-203ENST00000420489 MFSD14CQ5VZR4 134 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 SLC44A5Q8NCS7 719 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 GATA6Q92908 595 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 CEP63Q96MT8 703 aa4.99□□□□□ -1.61
CNGA1-203ENST00000420489 UTP14AQ9BVJ6 771 aaKnown RBP4.99□□□□□ -1.61
CNGA1-203ENST00000420489 TSPAN10Q9H1Z9 355 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms