RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 NT5C2P49902 561 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 GJA9P57773 515 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 TNFAIP2Q03169 654 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 GNASQ5JWF2 1037 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 CCSAPQ6IQ19 270 aaPredicted RBP17.77■□□□□ 0.44
RARA-205ENST00000420042 PNMA2Q9UL42 364 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 SMCHD1A6NHR9 2005 aa17.77■□□□□ 0.43
RARA-205ENST00000420042 NEDD4P46934 1319 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 ADCY6O43306 1168 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 ASGR1P07306 291 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 ZNF543Q08ER8 600 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 CCDC178Q5BJE1 867 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 IQCA1Q86XH1 822 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 TOX2Q96NM4 488 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 ZKSCAN3Q9BRR0 538 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 DSCC1Q9BVC3 393 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 KATNBL1Q9H079 304 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 UPF3AQ9H1J1 476 aaKnown RBP17.76■□□□□ 0.43
RARA-205ENST00000420042 TMEM39AQ9NV64 488 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 CTNNA3Q9UI47 895 aa17.76■□□□□ 0.43
RARA-205ENST00000420042 ELP1O95163 1332 aa17.75■□□□□ 0.43
RARA-205ENST00000420042 RAG1P15918 1043 aa17.75■□□□□ 0.43
RARA-205ENST00000420042 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
RARA-205ENST00000420042 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
RARA-205ENST00000420042 Q7L0L9 218 aa17.75■□□□□ 0.43
RARA-205ENST00000420042 EEPD1Q7L9B9 569 aa17.75■□□□□ 0.43
RARA-205ENST00000420042 ANKRD33Q7Z3H0 272 aa17.75■□□□□ 0.43
RARA-205ENST00000420042 MROH7Q68CQ1 1323 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.74■□□□□ 0.43
RARA-205ENST00000420042 PTPDC1A2A3K4 754 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 KIAA0355O15063 1070 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 KDM4AO75164 1064 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 SNHG28P0DPA3 235 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 BAATQ14032 418 aaPredicted RBP17.74■□□□□ 0.43
RARA-205ENST00000420042 SHHQ15465 462 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 GPATCH4Q5T3I0 446 aaKnown RBP17.74■□□□□ 0.43
RARA-205ENST00000420042 AP5M1Q9H0R1 490 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
RARA-205ENST00000420042 ADD3Q9UEY8 706 aaKnown RBP17.74■□□□□ 0.43
RARA-205ENST00000420042 A0A0U1RQG5 324 aaPredicted RBP17.73■□□□□ 0.43
RARA-205ENST00000420042 FAAP100Q0VG06 881 aa17.73■□□□□ 0.43
RARA-205ENST00000420042 IQSEC1Q6DN90 963 aa17.73■□□□□ 0.43
RARA-205ENST00000420042 TLK2Q86UE8 772 aa17.73■□□□□ 0.43
RARA-205ENST00000420042 FBXO16Q8IX29 292 aaPredicted RBP17.73■□□□□ 0.43
RARA-205ENST00000420042 PURBQ96QR8 312 aaKnown RBP17.73■□□□□ 0.43
RARA-205ENST00000420042 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
RARA-205ENST00000420042 ASTN1O14525 1302 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 B4E1Z4 1266 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 NFIBO00712 420 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 ZEB2O60315 1214 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 GOLGA8HP0CJ92 632 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 SMPD1P17405 629 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 ITGB8P26012 769 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 CALML3P27482 149 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 NKX3-2P78367 333 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 BEX3Q00994 111 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 C9orf50Q5SZB4 431 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 RNF207Q6ZRF8 634 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 KRT23Q9C075 422 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 VTA1Q9NP79 307 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 PDGFCQ9NRA1 345 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 GNEQ9Y223 722 aaKnown RBP17.72■□□□□ 0.43
RARA-205ENST00000420042 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
RARA-205ENST00000420042 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
RARA-205ENST00000420042 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 ARVCFO00192 962 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 DYNC1LI2O43237 492 aaPredicted RBP17.71■□□□□ 0.43
RARA-205ENST00000420042 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
RARA-205ENST00000420042 FPGSQ05932 587 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 KIAA1211Q6ZU35 1233 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 MORC4Q8TE76 937 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 MPHOSPH6Q99547 160 aaKnown RBP17.71■□□□□ 0.43
RARA-205ENST00000420042 UBA5Q9GZZ9 404 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 ZSWIM5Q9P217 1185 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 Q9Y3F1 56 aa17.71■□□□□ 0.43
RARA-205ENST00000420042 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.42
RARA-205ENST00000420042 LOC102724159A0A0B4J2E5 919 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 CTAGE5O15320 804 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 TLR3O15455 904 aaKnown RBP17.7■□□□□ 0.42
RARA-205ENST00000420042 CABYRO75952 493 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 PDE4AP27815 886 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 CDK7P50613 346 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 PWP2Q15269 919 aaKnown RBP17.7■□□□□ 0.42
RARA-205ENST00000420042 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
RARA-205ENST00000420042 TTC22Q5TAA0 569 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
RARA-205ENST00000420042 CXCL17Q6UXB2 119 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 SLC30A10Q6XR72 485 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 CLEC4DQ8WXI8 215 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 ANKS1AQ92625 1134 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
RARA-205ENST00000420042 TIMP1P01033 207 aa17.69■□□□□ 0.42
RARA-205ENST00000420042 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
RARA-205ENST00000420042 USH1GQ495M9 461 aa17.69■□□□□ 0.42
RARA-205ENST00000420042 SLC17A8Q8NDX2 589 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms