RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
CTSA-205ENST00000419493 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 RNF207Q6ZRF8 634 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 EEPD1Q7L9B9 569 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 FAM133AQ8N9E0 248 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
CTSA-205ENST00000419493 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
CTSA-205ENST00000419493 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
CTSA-205ENST00000419493 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
CTSA-205ENST00000419493 TAF6LQ9Y6J9 622 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 BRCA2P51587 3418 aa11.28□□□□□ -0.6
CTSA-205ENST00000419493 SMCHD1A6NHR9 2005 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 CDC45O75419 566 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
CTSA-205ENST00000419493 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 LRRC26Q2I0M4 334 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 CCDC144BQ3MJ40 725 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 RNF20Q5VTR2 975 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 NFXL1Q6ZNB6 911 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 NUP133Q8WUM0 1156 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
CTSA-205ENST00000419493 PURBQ96QR8 312 aaKnown RBP11.27□□□□□ -0.61
CTSA-205ENST00000419493 SPC25Q9HBM1 224 aa11.27□□□□□ -0.61
CTSA-205ENST00000419493 SLC27A2O14975 620 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 C6orf222P0C671 652 aaPredicted RBP11.26□□□□□ -0.61
CTSA-205ENST00000419493 MCM5P33992 734 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 NECTIN1Q15223 517 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
CTSA-205ENST00000419493 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 CATIPQ7Z7H3 387 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 FGD4Q96M96 766 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 MPHOSPH6Q99547 160 aaKnown RBP11.26□□□□□ -0.61
CTSA-205ENST00000419493 JMJD4Q9H9V9 463 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 PRKAG2Q9UGJ0 569 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 ATP11BQ9Y2G3 1177 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
CTSA-205ENST00000419493 WDR19Q8NEZ3 1342 aa11.26□□□□□ -0.61
CTSA-205ENST00000419493 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 B4DLN1 442 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 PRC1O43663 620 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 DUSP11O75319 330 aaKnown RBP11.25□□□□□ -0.61
CTSA-205ENST00000419493 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
CTSA-205ENST00000419493 RPS6P62753 249 aaKnown RBP11.25□□□□□ -0.61
CTSA-205ENST00000419493 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 HOMER1Q86YM7 354 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 MB21D2Q8IYB1 491 aaPredicted RBP11.25□□□□□ -0.61
CTSA-205ENST00000419493 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 IGDCC4Q8TDY8 1250 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
CTSA-205ENST00000419493 ABCB11O95342 1321 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 SYNRGQ9UMZ2 1314 aa11.25□□□□□ -0.61
CTSA-205ENST00000419493 FRMPD3Q5JV73 1810 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 ALDH5A1P51649 535 aaPredicted RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 ANTXR2P58335 489 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 RTP1P59025 263 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 PDE4DQ08499 809 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 GRM4Q14833 912 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 KCNA10Q16322 511 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 SLC30A10Q6XR72 485 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 FBXO16Q8IX29 292 aaPredicted RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 CTCFLQ8NI51 663 aaPredicted RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 PIBF1Q8WXW3 757 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 MYL10Q9BUA6 226 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 AP5M1Q9H0R1 490 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
CTSA-205ENST00000419493 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
CTSA-205ENST00000419493 MCM3APO60318 1980 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 ZBTB5O15062 677 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 DYNC1LI2O43237 492 aaPredicted RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 CFBP00751 764 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 IQSEC1Q6DN90 963 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 ZNF654Q8IZM8 581 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 DNERQ8NFT8 737 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 TMEM87BQ96K49 555 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 NEK1Q96PY6 1258 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 PIGSQ96S52 555 aa11.23□□□□□ -0.61
CTSA-205ENST00000419493 LBHD1Q9BQE6 289 aaPredicted RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
CTSA-205ENST00000419493 LRRC2Q9BYS8 371 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms