RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SEMA3EO15041 775 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 IPO7O95373 1038 aaKnown RBP13.32□□□□□ -0.28
LIMK1-202ENST00000418310 WDR59Q6PJI9 974 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
LIMK1-202ENST00000418310 RABEP2Q9H5N1 569 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
LIMK1-202ENST00000418310 KLRC4O43908 158 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 ERLIN1O75477 346 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 FGRP09769 529 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CXCR5P32302 372 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CCDC155Q8N6L0 562 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 TBCKQ8TEA7 893 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CCDC51Q96ER9 411 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 EYA3Q99504 573 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 TBC1D7Q9P0N9 293 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 POTEMA6NI47 508 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 BRD3Q15059 726 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 SOGA3Q5TF21 947 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 LRRIQ3A6PVS8 624 aaPredicted RBP13.31□□□□□ -0.28
LIMK1-202ENST00000418310 BTDP43251 543 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 PPARDQ03181 441 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 GPS2Q13227 327 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CASP8Q14790 479 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CCDC96Q2M329 555 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CLEC4GQ6UXB4 293 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 GLIS3Q8NEA6 775 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 GPCPD1Q9NPB8 672 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 ZNHIT6Q9NWK9 470 aaKnown RBP13.31□□□□□ -0.28
LIMK1-202ENST00000418310 EHD2Q9NZN4 543 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 CALCOCO1Q9P1Z2 691 aa13.31□□□□□ -0.28
LIMK1-202ENST00000418310 ITIH6Q6UXX5 1313 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 OR52Z1P0C646 297 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 GRM4Q14833 912 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 ARL6IP4Q66PJ3 421 aaKnown RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 HDXQ7Z353 690 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 TEX11Q8IYF3 940 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 CCDC148Q8NFR7 591 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 DUSP9Q99956 384 aaKnown RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 LRRC10BA6NIK2 292 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 CAPN2P17655 700 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 RASA1P20936 1047 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 HSP90B2PQ58FF3 399 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 TTI2Q6NXR4 508 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 NHEJ1Q9H9Q4 299 aaPredicted RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 LRWD1Q9UFC0 647 aa13.3□□□□□ -0.28
LIMK1-202ENST00000418310 SEC63Q9UGP8 760 aaKnown RBP13.3□□□□□ -0.28
LIMK1-202ENST00000418310 USP17L5A8MUK1 530 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 EPHB6O15197 1021 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 MARCH6O60337 910 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 TNNI2P48788 182 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 CEP95Q96GE4 821 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 CDK5RAP3Q96JB5 506 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 EP400Q96L91 3159 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 TDP2O95551 362 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 PCP11498 1178 aaKnown RBP13.29□□□□□ -0.28
LIMK1-202ENST00000418310 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
LIMK1-202ENST00000418310 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 P2RX5Q93086 422 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 ARAP2Q8WZ64 1704 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 UFL1O94874 794 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 BAG3O95817 575 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 ARID5AQ03989 594 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 UBE2SQ16763 222 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 PTPROQ16827 1216 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
LIMK1-202ENST00000418310 ZHX3Q9H4I2 956 aa13.29□□□□□ -0.28
LIMK1-202ENST00000418310 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
LIMK1-202ENST00000418310 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 CDK8P49336 464 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 TRIM14Q14142 442 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 WHAMMP3Q1A5X7 153 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 SBK1Q52WX2 424 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 FOXR1Q6PIV2 292 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 GIMAP8Q8ND71 665 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 CCDC47Q96A33 483 aaKnown RBP13.28□□□□□ -0.28
LIMK1-202ENST00000418310 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
LIMK1-202ENST00000418310 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms