RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 NSMFQ6X4W1 530 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 TMEM47Q9BQJ4 181 aa16.66■□□□□ 0.26
LINC01006-202ENST00000418309 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
LINC01006-202ENST00000418309 ADCY6O43306 1168 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 ASGR1P07306 291 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 NOVP48745 357 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 GJA9P57773 515 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 AKNAD1Q5T1N1 836 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 SYDE2Q5VT97 1194 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 CCSAPQ6IQ19 270 aaPredicted RBP16.65■□□□□ 0.26
LINC01006-202ENST00000418309 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 FAM161BQ96MY7 647 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 TOX2Q96NM4 488 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
LINC01006-202ENST00000418309 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
LINC01006-202ENST00000418309 KIAA0355O15063 1070 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 ICAM1P05362 532 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 ITGB8P26012 769 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 CST5P28325 142 aaPredicted RBP16.64■□□□□ 0.25
LINC01006-202ENST00000418309 NUCB1Q02818 461 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 FAAP100Q0VG06 881 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 EEPD1Q7L9B9 569 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 ANKRD33Q7Z3H0 272 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 UPF3AQ9H1J1 476 aaKnown RBP16.64■□□□□ 0.25
LINC01006-202ENST00000418309 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
LINC01006-202ENST00000418309 CYP39A1Q9NYL5 469 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 STXBP5LQ9Y2K9 1186 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 ELP1O95163 1332 aa16.64■□□□□ 0.25
LINC01006-202ENST00000418309 ZNF213O14771 459 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
LINC01006-202ENST00000418309 BEX3Q00994 111 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 ZNF697Q5TEC3 545 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 FAM109BQ6ICB4 259 aaPredicted RBP16.63■□□□□ 0.25
LINC01006-202ENST00000418309 CWC27Q6UX04 472 aaKnown RBP16.63■□□□□ 0.25
LINC01006-202ENST00000418309 BTNL9Q6UXG8 535 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 TTC14Q96N46 770 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 KATNBL1Q9H079 304 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 AP5M1Q9H0R1 490 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 RANBP17Q9H2T7 1088 aaKnown RBP16.63■□□□□ 0.25
LINC01006-202ENST00000418309 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 MROH7Q68CQ1 1323 aa16.63■□□□□ 0.25
LINC01006-202ENST00000418309 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
LINC01006-202ENST00000418309 FPGSQ05932 587 aa16.62■□□□□ 0.25
LINC01006-202ENST00000418309 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
LINC01006-202ENST00000418309 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
LINC01006-202ENST00000418309 ESR2Q92731 530 aa16.62■□□□□ 0.25
LINC01006-202ENST00000418309 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
LINC01006-202ENST00000418309 OSBPL3Q9H4L5 887 aa16.62■□□□□ 0.25
LINC01006-202ENST00000418309 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
LINC01006-202ENST00000418309 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 ARVCFO00192 962 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 HIP1O00291 1037 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 DYNC1LI2O43237 492 aaPredicted RBP16.61■□□□□ 0.25
LINC01006-202ENST00000418309 PDHBP11177 359 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 IQSEC1Q6DN90 963 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 TLK2Q86UE8 772 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 FBXO16Q8IX29 292 aaPredicted RBP16.61■□□□□ 0.25
LINC01006-202ENST00000418309 RNPC3Q96LT9 517 aaKnown RBP16.61■□□□□ 0.25
LINC01006-202ENST00000418309 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
LINC01006-202ENST00000418309 PDGFCQ9NRA1 345 aa16.61■□□□□ 0.25
LINC01006-202ENST00000418309 ADD3Q9UEY8 706 aaKnown RBP16.61■□□□□ 0.25
LINC01006-202ENST00000418309 NFIBO00712 420 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 TLR3O15455 904 aaKnown RBP16.6■□□□□ 0.25
LINC01006-202ENST00000418309 ZEB2O60315 1214 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 TIMP1P01033 207 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 SMPD1P17405 629 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 CDK7P50613 346 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 EPHB4P54760 987 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
LINC01006-202ENST00000418309 ASTN1O14525 1302 aa16.6■□□□□ 0.25
LINC01006-202ENST00000418309 CTAGE5O15320 804 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 CALML3P27482 149 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
LINC01006-202ENST00000418309 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 FSCN1Q16658 493 aaKnown RBP16.59■□□□□ 0.25
LINC01006-202ENST00000418309 TAPT1Q6NXT6 567 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 CXCL17Q6UXB2 119 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 VTA1Q9NP79 307 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 NEDD4P46934 1319 aa16.59■□□□□ 0.25
LINC01006-202ENST00000418309 KDM4AO75164 1064 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 CABYRO75952 493 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 PTGS1P23219 599 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 ALDH5A1P51649 535 aaPredicted RBP16.58■□□□□ 0.24
LINC01006-202ENST00000418309 NKX3-2P78367 333 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 MFSD5Q6N075 450 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 GUCD1Q96NT3 240 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 TBX21Q9UL17 535 aa16.58■□□□□ 0.24
LINC01006-202ENST00000418309 B4E1Z4 1266 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 DLL1O00548 723 aa16.57■□□□□ 0.24
LINC01006-202ENST00000418309 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms