RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 IL17RBQ9NRM6 502 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 BAZ2BQ9UIF8 2168 aaKnown RBP15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 KIF5BP33176 963 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 WDR78Q5VTH9 848 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 CLEC17AQ6ZS10 378 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 FERMT3Q86UX7 667 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 CCDC82Q8N4S0 544 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 PNMA1Q8ND90 353 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 WASF1Q92558 559 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 ANKS1AQ92625 1134 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 FLRT1Q9NZU1 646 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 RABGAP1Q9Y3P9 1069 aa15.22■□□□□ 0.03
HLA-DMB-258ENST00000418107 NID2Q14112 1375 aa15.21■□□□□ 0.03
HLA-DMB-258ENST00000418107 USP17L15C9J2P7 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L13C9JLJ4 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L11C9JVI0 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L18D6R9N7 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L22D6RA61 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L17D6RBQ6 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L19D6RCP7 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L20D6RJB6 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 AKR1B1P15121 316 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 IFNAR1P17181 557 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 CCNA1P78396 465 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 ATP2B2Q01814 1243 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 GUCY1B3Q02153 619 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP17L24Q0WX57 530 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 TRIM29Q14134 588 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 CERKLQ49MI3 558 aaPredicted RBP15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 PPP4R3BQ5MIZ7 849 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 MFSD14CQ5VZR4 134 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 RCSD1Q6JBY9 416 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 C12orf42Q96LP6 360 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 CCDC17Q96LX7 622 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 ALG1Q9BT22 464 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 SENP6Q9GZR1 1112 aaPredicted RBP15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 FAM217BQ9NTX9 383 aaPredicted RBP15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.02
HLA-DMB-258ENST00000418107 LAMA2P24043 3122 aaKnown RBP15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 MYH4Q9Y623 1939 aa15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 TOP1P11387 765 aaKnown RBP15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 SHMT1P34896 483 aa15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 NTRK3Q16288 839 aa15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 CEP95Q96GE4 821 aa15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 TMEM47Q9BQJ4 181 aa15.2■□□□□ 0.02
HLA-DMB-258ENST00000418107 SLC15A5A6NIM6 579 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 VCAM1P19320 739 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 PTPREP23469 700 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 CNGA1P29973 690 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 GNAQP50148 359 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 ATN1P54259 1190 aaPredicted RBP15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 USP14P54578 494 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 TROAPQ12815 778 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 GNL2Q13823 731 aaKnown RBP15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 CATSPERGQ6ZRH7 1159 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 CMTR1Q8N1G2 835 aaKnown RBP15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 ACER1Q8TDN7 264 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 ZSCAN16Q9H4T2 348 aaPredicted RBP15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 STK36Q9NRP7 1315 aa15.19■□□□□ 0.02
HLA-DMB-258ENST00000418107 FRMPD3Q5JV73 1810 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 DEXIO95424 95 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 CYP2C19P33261 490 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 LBHD1Q9BQE6 289 aaPredicted RBP15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 KIAA1683Q9H0B3 1180 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 CABP5Q9NP86 173 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 IVNS1ABPQ9Y6Y0 642 aa15.18■□□□□ 0.02
HLA-DMB-258ENST00000418107 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 TTLL1O95922 423 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 HOXC6P09630 235 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 GRB14Q14449 540 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 GRM4Q14833 912 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 CSPP1Q1MSJ5 1256 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 ABCB5Q2M3G0 1257 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 TRPV1Q8NER1 839 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 LPAR1Q92633 364 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 GUCD1Q96NT3 240 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 RPAP3Q9H6T3 665 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 MTMR4Q9NYA4 1195 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
HLA-DMB-258ENST00000418107 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 PRPF3O43395 683 aaKnown RBP15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 MSCO60682 206 aa15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 XBP1P17861 261 aa15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 SKOR2Q2VWA4 1001 aaPredicted RBP15.16■□□□□ 0.02
HLA-DMB-258ENST00000418107 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms