RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 DDX19BQ9UMR2 479 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 YBX2Q9Y2T7 364 aaKnown RBP9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 Q9Y3F1 56 aa9.37□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ASTN1O14525 1302 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GRIN2DO15399 1336 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 UMODL1Q5DID0 1318 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TMEM232C9JQI7 657 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PRDM1O75626 825 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SUPT20HL2P0C7V6 817 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 BMP1P13497 986 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ATP2A2P16615 1042 aaKnown RBP9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SMPD1P17405 629 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PLA2G5P39877 138 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TDO2P48775 406 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 STAT2P52630 851 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 RABGGTBP53611 331 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 IKQ13123 557 aaPredicted RBP9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 FAM160B2Q86V87 743 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 STAG1Q8WVM7 1258 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 APPBP2Q92624 585 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TRERF1Q96PN7 1200 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 A1CFQ9NQ94 594 aaKnown RBP9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 RNF146Q9NTX7 359 aa9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PRRC2BQ5JSZ5 2229 aaKnown RBP9.36□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 RNF113AO15541 343 aaKnown RBP9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 B4GALT4O60513 344 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ZFYP08048 801 aaPredicted RBP9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SLC3A2P08195 630 aaKnown RBP9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PFKMP08237 780 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TSPY3P0CV98 308 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TSPY8P0CW00 308 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ALAS1P13196 640 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SLC1A4P43007 532 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PDE4BQ07343 736 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 KBTBD3Q8NAB2 608 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 OSBP2Q969R2 916 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GMCL1Q96IK5 515 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 AGBL1Q96MI9 1066 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 NACAP1Q9BZK3 213 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ECHDC1Q9NTX5 307 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CHD9Q3L8U1 2897 aa9.35□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ZNF536O15090 1300 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ERC2O15083 957 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GPAA1O43292 621 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PLA2G6O60733 806 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ACTN1P12814 892 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 MYOGP15173 224 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 POU3F3P20264 500 aaPredicted RBP9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 MCCP23508 829 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PSMC6P62333 389 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TFAP4Q01664 338 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TFF2Q03403 129 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 LRRFIP1Q32MZ4 808 aaKnown RBP9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 RCSD1Q6JBY9 416 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 TAPT1Q6NXT6 567 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 KIAA1211Q6ZU35 1233 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 EEPD1Q7L9B9 569 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 IFNL3Q8IZI9 196 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 SCLYQ96I15 445 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 GPATCH3Q96I76 525 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 NECAB3Q96P71 396 aaPredicted RBP9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 ALDH8A1Q9H2A2 487 aaPredicted RBP9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 VTA1Q9NP79 307 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 PDGFCQ9NRA1 345 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 CYP39A1Q9NYL5 469 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 COG5Q9UP83 839 aa9.34□□□□□ -0.91
HLA-DPA1-241ENST00000417724 KIF28PB7ZC32 967 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TTLL4Q14679 1199 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 DUSP28Q4G0W2 176 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 NSMFQ6X4W1 530 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 DEFB128Q7Z7B8 93 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 FBXO16Q8IX29 292 aaPredicted RBP9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PHOSPHO2Q8TCD6 241 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 EPB41L4AQ9HCS5 686 aaPredicted RBP9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 GPHNQ9NQX3 736 aaPredicted RBP9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ADD3Q9UEY8 706 aaKnown RBP9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MTCH2Q9Y6C9 303 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 MUC3AQ02505 3323 aa9.33□□□□□ -0.92
HLA-DPA1-241ENST00000417724 TNKSO95271 1327 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 LOC102724159A0A0B4J2E5 919 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 SMARCA5O60264 1052 aaPredicted RBP9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CA3P07451 260 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 CYP2C9P11712 490 aa9.32□□□□□ -0.92
HLA-DPA1-241ENST00000417724 PTGS1P23219 599 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms