RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SNAP25P60880 206 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 ZNF543Q08ER8 600 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 MUM1L1Q5H9M0 696 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 GPATCH4Q5T3I0 446 aaKnown RBP21.65■■□□□ 1.06
VPS16-204ENST00000417508 ANKRD33Q7Z3H0 272 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 LENG1Q96BZ8 264 aaPredicted RBP21.65■■□□□ 1.06
VPS16-204ENST00000417508 GLT1D1Q96MS3 346 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 SZT2Q5T011 3432 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 DCDC2CA8MYV0 355 aa21.64■■□□□ 1.05
VPS16-204ENST00000417508 CLTBP09497 229 aa21.64■■□□□ 1.05
VPS16-204ENST00000417508 C6orf222P0C671 652 aaPredicted RBP21.64■■□□□ 1.05
VPS16-204ENST00000417508 TNFAIP2Q03169 654 aa21.64■■□□□ 1.05
VPS16-204ENST00000417508 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
VPS16-204ENST00000417508 IQSEC1Q6DN90 963 aa21.64■■□□□ 1.05
VPS16-204ENST00000417508 RASGRP2Q7LDG7 609 aa21.64■■□□□ 1.05
VPS16-204ENST00000417508 ANKS1AQ92625 1134 aa21.64■■□□□ 1.05
VPS16-204ENST00000417508 ADD3Q9UEY8 706 aaKnown RBP21.64■■□□□ 1.05
VPS16-204ENST00000417508 FRMPD2Q68DX3 1309 aaPredicted RBP21.63■■□□□ 1.05
VPS16-204ENST00000417508 TRIM43BA6NCK2 446 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 KIAA0355O15063 1070 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 GNASQ5JWF2 1037 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 NSMFQ6X4W1 530 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 MORC4Q8TE76 937 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 BADQ92934 168 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 TRIM43Q96BQ3 446 aaPredicted RBP21.63■■□□□ 1.05
VPS16-204ENST00000417508 Q9Y3F1 56 aa21.63■■□□□ 1.05
VPS16-204ENST00000417508 LTBP2Q14767 1821 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 MROH7Q68CQ1 1323 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 ASGR1P07306 291 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 SH3RF1Q7Z6J0 888 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 KRT23Q9C075 422 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 MAF1Q9H063 256 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 CNNM2Q9H8M5 875 aa21.62■■□□□ 1.05
VPS16-204ENST00000417508 NEDD4P46934 1319 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 WDR19Q8NEZ3 1342 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 ADCY6O43306 1168 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 PQBP1O60828 265 aaKnown RBP21.61■■□□□ 1.05
VPS16-204ENST00000417508 KDM4AO75164 1064 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 BAATQ14032 418 aaPredicted RBP21.61■■□□□ 1.05
VPS16-204ENST00000417508 NOL8Q76FK4 1167 aaKnown RBP21.61■■□□□ 1.05
VPS16-204ENST00000417508 DEFB123Q8N688 67 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 VTI1AQ96AJ9 217 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 SEZ6LQ9BYH1 1024 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 VTA1Q9NP79 307 aa21.61■■□□□ 1.05
VPS16-204ENST00000417508 GNEQ9Y223 722 aaKnown RBP21.61■■□□□ 1.05
VPS16-204ENST00000417508 MYADML2A6NDP7 307 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 CABYRO75952 493 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 RAG1P15918 1043 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 CDK7P50613 346 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 TTC22Q5TAA0 569 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 FAM109BQ6ICB4 259 aaPredicted RBP21.6■■□□□ 1.05
VPS16-204ENST00000417508 PNMA1Q8ND90 353 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 RUFY2Q8WXA3 655 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 ZSCAN10Q96SZ4 725 aaPredicted RBP21.6■■□□□ 1.05
VPS16-204ENST00000417508 ZKSCAN3Q9BRR0 538 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 AP5M1Q9H0R1 490 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 KAT14Q9H8E8 782 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 TMEM39AQ9NV64 488 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 ZSWIM5Q9P217 1185 aa21.6■■□□□ 1.05
VPS16-204ENST00000417508 LAMA4Q16363 1823 aa21.59■■□□□ 1.05
VPS16-204ENST00000417508 A0A0U1RQG5 324 aaPredicted RBP21.59■■□□□ 1.05
VPS16-204ENST00000417508 ZEB2O60315 1214 aa21.59■■□□□ 1.05
VPS16-204ENST00000417508 FAAP100Q0VG06 881 aa21.59■■□□□ 1.05
VPS16-204ENST00000417508 TAPT1Q6NXT6 567 aa21.59■■□□□ 1.05
VPS16-204ENST00000417508 RGS22Q8NE09 1264 aa21.59■■□□□ 1.05
VPS16-204ENST00000417508 MPHOSPH6Q99547 160 aaKnown RBP21.59■■□□□ 1.05
VPS16-204ENST00000417508 LAMA3Q16787 3333 aa21.59■■□□□ 1.05
VPS16-204ENST00000417508 ASTN1O14525 1302 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 RAD50Q92878 1312 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 B4DLN1 442 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 B4E1Z4 1266 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 ARVCFO00192 962 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 CTAGE5O15320 804 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 PDE4AP27815 886 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 MRPL12P52815 198 aaKnown RBP21.58■■□□□ 1.05
VPS16-204ENST00000417508 SHHQ15465 462 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 RNF207Q6ZRF8 634 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 CLEC4DQ8WXI8 215 aa21.58■■□□□ 1.05
VPS16-204ENST00000417508 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.57■■□□□ 1.04
VPS16-204ENST00000417508 PTPDC1A2A3K4 754 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 NFIBO00712 420 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 SMPD1P17405 629 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 ALDH5A1P51649 535 aaPredicted RBP21.57■■□□□ 1.04
VPS16-204ENST00000417508 ASPRV1Q53RT3 343 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 TLK2Q86UE8 772 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 DNERQ8NFT8 737 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 MTMR10Q9NXD2 777 aa21.57■■□□□ 1.04
VPS16-204ENST00000417508 TLR3O15455 904 aaKnown RBP21.56■■□□□ 1.04
VPS16-204ENST00000417508 DYNC1LI2O43237 492 aaPredicted RBP21.56■■□□□ 1.04
VPS16-204ENST00000417508 TIMP1P01033 207 aa21.56■■□□□ 1.04
VPS16-204ENST00000417508 IRX5P78411 483 aaPredicted RBP21.56■■□□□ 1.04
VPS16-204ENST00000417508 FSCN1Q16658 493 aaKnown RBP21.56■■□□□ 1.04
VPS16-204ENST00000417508 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
VPS16-204ENST00000417508 ENAHQ8N8S7 591 aaPredicted RBP21.56■■□□□ 1.04
VPS16-204ENST00000417508 UBAC1Q9BSL1 405 aa21.56■■□□□ 1.04
VPS16-204ENST00000417508 PDGFCQ9NRA1 345 aa21.56■■□□□ 1.04
VPS16-204ENST00000417508 LCTP09848 1927 aa21.55■■□□□ 1.04
VPS16-204ENST00000417508 RBM47A0AV96 593 aaKnown RBP21.55■■□□□ 1.04
VPS16-204ENST00000417508 GOLGA8HP0CJ92 632 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms