RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 MAN1B1Q9UKM7 699 aa21.82■■□□□ 1.08
RAB3IP-205ENST00000417413 TMEM232C9JQI7 657 aa21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 MRPL12P52815 198 aaKnown RBP21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 C9orf131Q5VYM1 1079 aa21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 DPY19L2Q6NUT2 758 aa21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 PAGE5Q96GU1 130 aa21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 ZC3H4Q9UPT8 1303 aaKnown RBP21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 GOLGB1Q14789 3259 aaKnown RBP21.81■■□□□ 1.08
RAB3IP-205ENST00000417413 OR52Z1P0C646 297 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 BMP6P22004 513 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 ZNF75DP51815 510 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 UBE2SQ16763 222 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 SAMD7Q7Z3H4 446 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 ZSCAN30Q86W11 494 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 PYM1Q9BRP8 204 aaKnown RBP21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 PSTPIP2Q9H939 334 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 PCDHA1Q9Y5I3 950 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 PHF20L1A8MW92 1017 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 NEMFO60524 1076 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 PDXDC2PQ6P474 469 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 IQUBQ8NA54 791 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 SMARCE1Q969G3 411 aa21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 SCAF8Q9UPN6 1271 aaKnown RBP21.8■■□□□ 1.08
RAB3IP-205ENST00000417413 ASTN2O75129 1339 aaPredicted RBP21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 MORC3Q14149 939 aa21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 NCAPHQ15003 741 aa21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 TRIML1Q8N9V2 468 aa21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 GLT8D2Q9H1C3 349 aa21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 GOPCQ9HD26 462 aa21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 GPRC5DQ9NZD1 345 aa21.79■■□□□ 1.08
RAB3IP-205ENST00000417413 SBF1O95248 1867 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 IKBKBO14920 756 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 PTMAP06454 111 aaKnown RBP21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 CDC25AP30304 524 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 SNAP25P60880 206 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 KIF4BQ2VIQ3 1234 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 TBC1D10BQ4KMP7 808 aaPredicted RBP21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 SPICE1Q8N0Z3 855 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 CCDC34Q96HJ3 373 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 AMNQ9BXJ7 453 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 TRIM5Q9C035 493 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 CCSER1Q9C0I3 900 aa21.78■■□□□ 1.08
RAB3IP-205ENST00000417413 AFMP43652 599 aa21.77■■□□□ 1.08
RAB3IP-205ENST00000417413 MTMR9Q96QG7 549 aa21.77■■□□□ 1.08
RAB3IP-205ENST00000417413 VCPKMTQ9H867 229 aa21.77■■□□□ 1.08
RAB3IP-205ENST00000417413 PRR12Q9ULL5 1215 aa21.77■■□□□ 1.08
RAB3IP-205ENST00000417413 PP2D1A8MPX8 630 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 SMTNL1A8MU46 457 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 TXLNAP40222 546 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 DPYDQ12882 1025 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 IKQ13123 557 aaPredicted RBP21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 FBXO11Q86XK2 927 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 POTEDQ86YR6 584 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 HACL1Q9UJ83 578 aa21.77■■□□□ 1.07
RAB3IP-205ENST00000417413 SMC2O95347 1197 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 TDP2O95551 362 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 ASNSP08243 561 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 KARSQ15046 597 aaKnown RBP21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 FAM83BQ5T0W9 1011 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 PPP4R3AQ6IN85 833 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 AK8Q96MA6 479 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 MTRQ99707 1265 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 ZKSCAN5Q9Y2L8 839 aa21.76■■□□□ 1.07
RAB3IP-205ENST00000417413 SMCHD1A6NHR9 2005 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L15C9J2P7 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L13C9JLJ4 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L11C9JVI0 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L18D6R9N7 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L22D6RA61 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L17D6RBQ6 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L19D6RCP7 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L20D6RJB6 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 SLC37A4O43826 429 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 CDC25BP30305 580 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 STAT2P52630 851 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L24Q0WX57 530 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 USP17L6PQ6QN14 398 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 MLKLQ8NB16 471 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 GLIS2Q9BZE0 524 aaPredicted RBP21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 HSD3B7Q9H2F3 369 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 SH2D4AQ9H788 454 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 DISC1Q9NRI5 854 aa21.75■■□□□ 1.07
RAB3IP-205ENST00000417413 MEIS2O14770 477 aa21.74■■□□□ 1.07
RAB3IP-205ENST00000417413 PLA2G6O60733 806 aa21.74■■□□□ 1.07
RAB3IP-205ENST00000417413 CASP1P29466 404 aa21.74■■□□□ 1.07
RAB3IP-205ENST00000417413 MRFAP1L1Q96HT8 127 aa21.74■■□□□ 1.07
RAB3IP-205ENST00000417413 UBA7P41226 1012 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 CALCRLQ16602 461 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 NAALADL2Q58DX5 795 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 APOBEC3FQ8IUX4 373 aaKnown RBP21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 IGSF22Q8N9C0 903 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 SPC24Q8NBT2 197 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 GSDMAQ96QA5 445 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 DEFB129Q9H1M3 183 aa21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 RTN4Q9NQC3 1192 aaKnown RBP21.73■■□□□ 1.07
RAB3IP-205ENST00000417413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms