RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CAPN12Q6ZSI9 719 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 TMTC1Q8IUR5 882 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 ANAPC4Q9UJX5 808 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 TMOD1P28289 359 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 ATP5DP30049 168 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 UBE2SQ16763 222 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 ZMYM1Q5SVZ6 1142 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 PALLDQ8WX93 1383 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 MMP10P09238 476 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 INTS8Q75QN2 995 aaKnown RBP11.69□□□□□ -0.54
COL12A1-203ENST00000416123 SYCE1Q8N0S2 351 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
COL12A1-203ENST00000416123 A0A087WWV3 80 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 SEMA3EO15041 775 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 ALDH3A1P30838 453 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 CEP57Q86XR8 500 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 PCDHA7Q9UN72 937 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 TUBB4AP04350 444 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 IVLP07476 585 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 RPS6KC1Q96S38 1066 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-203ENST00000416123 KCNK3O14649 394 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 HOXA13P31271 388 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-203ENST00000416123 GUCY2FP51841 1108 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 SYNE4Q8N205 404 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 GSDMBQ8TAX9 411 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 IFNB1P01574 187 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 TMEM191BP0C7N4 346 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 ADAM9Q13443 819 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 SETDB1Q15047 1291 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 AMFRQ9UKV5 643 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 PDE6CP51160 858 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 PIGSQ96S52 555 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 ERBB3P21860 1342 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 KCTD2Q14681 263 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 ODR4Q5SWX8 454 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 GRAMD1CQ8IYS0 662 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 STIM2Q9P246 746 aa11.68□□□□□ -0.54
COL12A1-203ENST00000416123 TRPM1Q7Z4N2 1603 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 CFAP221Q4G0U5 840 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 ARMCX3Q9UH62 379 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-203ENST00000416123 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 SNAP23O00161 211 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 GIPC1O14908 333 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 ASPRV1Q53RT3 343 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 MTMR6Q9Y217 621 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 EBAG9O00559 213 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 CLIC2O15247 247 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 GMNNO75496 209 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 OSTNP61366 133 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 TUBB4BP68371 445 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 LRRC41Q15345 812 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 GBP6Q6ZN66 633 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 TRIM50Q86XT4 487 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 AMNQ9BXJ7 453 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 OATP04181 439 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 PCDHB4Q9Y5E5 795 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 BBOX1O75936 387 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 CCND2P30279 289 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 SH3RF3Q8TEJ3 882 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-203ENST00000416123 YWHAEP62258 255 aaKnown RBP11.67□□□□□ -0.54
COL12A1-203ENST00000416123 ARMC9Q7Z3E5 817 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 CCDC84Q86UT8 332 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-203ENST00000416123 TBCKQ8TEA7 893 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 AFAP1L1Q8TED9 768 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 EPSTI1Q96J88 318 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 PARP2Q9UGN5 583 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 SAT1P21673 171 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 CDC25AP30304 524 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 GOLGA8FQ08AF8 430 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 GOLGA8DPQ0D2H9 430 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 VPS37BQ9H9H4 285 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
COL12A1-203ENST00000416123 MAGED2Q9UNF1 606 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-203ENST00000416123 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 AOC3Q16853 763 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 TTBK2Q6IQ55 1244 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 FMNL1O95466 1100 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-203ENST00000416123 SUPT20HL1Q3ZLR7 823 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 ZNF341Q9BYN7 854 aa11.66□□□□□ -0.54
COL12A1-203ENST00000416123 CYP21A2P08686 494 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms