RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 SLC38A3Q99624 504 aa4.37□□□□□ -1.71
APP-207ENST00000415997 MBNL3Q9NUK0 354 aaKnown RBP4.37□□□□□ -1.71
APP-207ENST00000415997 ADAMTS6Q9UKP5 1117 aa4.37□□□□□ -1.71
APP-207ENST00000415997 SLX4Q8IY92 1834 aa4.37□□□□□ -1.71
APP-207ENST00000415997 NCAPD2Q15021 1401 aa4.37□□□□□ -1.71
APP-207ENST00000415997 NCOR1O75376 2440 aa4.36□□□□□ -1.71
APP-207ENST00000415997 LEFTY1O75610 366 aa4.36□□□□□ -1.71
APP-207ENST00000415997 B3GALT4O96024 378 aa4.36□□□□□ -1.71
APP-207ENST00000415997 HCLS1P14317 486 aaPredicted RBP4.36□□□□□ -1.71
APP-207ENST00000415997 ITIH2P19823 946 aa4.36□□□□□ -1.71
APP-207ENST00000415997 HOXC9P31274 260 aa4.36□□□□□ -1.71
APP-207ENST00000415997 HUNKP57058 714 aa4.36□□□□□ -1.71
APP-207ENST00000415997 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
APP-207ENST00000415997 WFDC3Q8IUB2 231 aa4.36□□□□□ -1.71
APP-207ENST00000415997 SMYD4Q8IYR2 804 aaPredicted RBP4.36□□□□□ -1.71
APP-207ENST00000415997 DEFB123Q8N688 67 aa4.36□□□□□ -1.71
APP-207ENST00000415997 LRRN4CLQ8ND94 238 aa4.36□□□□□ -1.71
APP-207ENST00000415997 GLIS3Q8NEA6 775 aa4.36□□□□□ -1.71
APP-207ENST00000415997 MISP3Q96FF7 219 aa4.36□□□□□ -1.71
APP-207ENST00000415997 BRIP1Q9BX63 1249 aa4.36□□□□□ -1.71
APP-207ENST00000415997 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
APP-207ENST00000415997 GLIS2Q9BZE0 524 aaPredicted RBP4.36□□□□□ -1.71
APP-207ENST00000415997 ZNF576Q9H609 170 aa4.36□□□□□ -1.71
APP-207ENST00000415997 PRDM7Q9NQW5 492 aa4.36□□□□□ -1.71
APP-207ENST00000415997 AKAP11Q9UKA4 1901 aa4.36□□□□□ -1.71
APP-207ENST00000415997 LRRC10BA6NIK2 292 aa4.35□□□□□ -1.71
APP-207ENST00000415997 TMPRSS2O15393 492 aa4.35□□□□□ -1.71
APP-207ENST00000415997 GADD45BO75293 160 aaPredicted RBP4.35□□□□□ -1.71
APP-207ENST00000415997 SERPINB2P05120 415 aa4.35□□□□□ -1.71
APP-207ENST00000415997 NPR3P17342 541 aa4.35□□□□□ -1.71
APP-207ENST00000415997 ITGAEP38570 1179 aa4.35□□□□□ -1.71
APP-207ENST00000415997 ID3Q02535 119 aa4.35□□□□□ -1.71
APP-207ENST00000415997 PRKCQQ04759 706 aa4.35□□□□□ -1.71
APP-207ENST00000415997 AP3B2Q13367 1082 aa4.35□□□□□ -1.71
APP-207ENST00000415997 FBLN7Q53RD9 439 aa4.35□□□□□ -1.71
APP-207ENST00000415997 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
APP-207ENST00000415997 Q7L0L9 218 aa4.35□□□□□ -1.71
APP-207ENST00000415997 NME9Q86XW9 330 aa4.35□□□□□ -1.71
APP-207ENST00000415997 RAPGEF4Q8WZA2 1011 aa4.35□□□□□ -1.71
APP-207ENST00000415997 LTV1Q96GA3 475 aaPredicted RBP4.35□□□□□ -1.71
APP-207ENST00000415997 FANCD2OSQ96PS1 177 aa4.35□□□□□ -1.71
APP-207ENST00000415997 ATXN3LQ9H3M9 355 aa4.35□□□□□ -1.71
APP-207ENST00000415997 GSX1Q9H4S2 264 aaPredicted RBP4.35□□□□□ -1.71
APP-207ENST00000415997 CCDC86Q9H6F5 360 aaKnown RBP4.35□□□□□ -1.71
APP-207ENST00000415997 NPHS2Q9NP85 383 aa4.35□□□□□ -1.71
APP-207ENST00000415997 ZNF277Q9NRM2 450 aaPredicted RBP4.35□□□□□ -1.71
APP-207ENST00000415997 TMOD3Q9NYL9 352 aa4.35□□□□□ -1.71
APP-207ENST00000415997 HDAC9Q9UKV0 1011 aa4.35□□□□□ -1.71
APP-207ENST00000415997 VAV3Q9UKW4 847 aa4.35□□□□□ -1.71
APP-207ENST00000415997 BRPF3Q9ULD4 1205 aa4.35□□□□□ -1.71
APP-207ENST00000415997 U3KQE9 123 aa4.35□□□□□ -1.71
APP-207ENST00000415997 KTN1Q86UP2 1357 aaKnown RBP4.35□□□□□ -1.71
APP-207ENST00000415997 MRC1P22897 1456 aa4.35□□□□□ -1.71
APP-207ENST00000415997 ZFHX4Q86UP3 3567 aa4.35□□□□□ -1.71
APP-207ENST00000415997 CACNA1SQ13698 1873 aa4.35□□□□□ -1.71
APP-207ENST00000415997 MUC6Q6W4X9 2439 aa4.34□□□□□ -1.71
APP-207ENST00000415997 SRGNP10124 158 aa4.34□□□□□ -1.71
APP-207ENST00000415997 CRKLP46109 303 aaKnown RBP4.34□□□□□ -1.71
APP-207ENST00000415997 MAP3K12Q12852 859 aa4.34□□□□□ -1.71
APP-207ENST00000415997 ORC1Q13415 861 aa4.34□□□□□ -1.71
APP-207ENST00000415997 TTLL4Q14679 1199 aa4.34□□□□□ -1.71
APP-207ENST00000415997 MLANAQ16655 118 aa4.34□□□□□ -1.71
APP-207ENST00000415997 IFI16Q16666 785 aaKnown RBP4.34□□□□□ -1.71
APP-207ENST00000415997 KIAA0319Q5VV43 1072 aa4.34□□□□□ -1.71
APP-207ENST00000415997 STYK1Q6J9G0 422 aa4.34□□□□□ -1.71
APP-207ENST00000415997 UBE2Q1Q7Z7E8 422 aa4.34□□□□□ -1.71
APP-207ENST00000415997 USHBP1Q8N6Y0 703 aa4.34□□□□□ -1.71
APP-207ENST00000415997 TMC1Q8TDI8 760 aa4.34□□□□□ -1.71
APP-207ENST00000415997 TMEM40Q8WWA1 233 aa4.34□□□□□ -1.71
APP-207ENST00000415997 KCNB2Q92953 911 aa4.34□□□□□ -1.71
APP-207ENST00000415997 ZNF622Q969S3 477 aaKnown RBP eCLIP4.34□□□□□ -1.71
APP-207ENST00000415997 HRASLS5Q96KN8 279 aa4.34□□□□□ -1.71
APP-207ENST00000415997 MPHOSPH9Q99550 1183 aa4.34□□□□□ -1.71
APP-207ENST00000415997 DISC1Q9NRI5 854 aa4.34□□□□□ -1.71
APP-207ENST00000415997 CRIM1Q9NZV1 1036 aa4.34□□□□□ -1.71
APP-207ENST00000415997 RTL1A6NKG5 1358 aa4.34□□□□□ -1.71
APP-207ENST00000415997 TJP1Q07157 1748 aa4.34□□□□□ -1.71
APP-207ENST00000415997 CHD8Q9HCK8 2581 aa4.34□□□□□ -1.72
APP-207ENST00000415997 SOS1Q07889 1333 aaPredicted RBP4.33□□□□□ -1.72
APP-207ENST00000415997 CENPJQ9HC77 1338 aaPredicted RBP4.33□□□□□ -1.72
APP-207ENST00000415997 TMEM265A0A087WTH1 108 aa4.33□□□□□ -1.72
APP-207ENST00000415997 ZNF862O60290 1169 aa4.33□□□□□ -1.72
APP-207ENST00000415997 TBC1D8O95759 1140 aa4.33□□□□□ -1.72
APP-207ENST00000415997 NEFLP07196 543 aa4.33□□□□□ -1.72
APP-207ENST00000415997 PDE6BP35913 854 aa4.33□□□□□ -1.72
APP-207ENST00000415997 IARSP41252 1262 aaKnown RBP4.33□□□□□ -1.72
APP-207ENST00000415997 CCDC93Q567U6 631 aa4.33□□□□□ -1.72
APP-207ENST00000415997 ANGEL2Q5VTE6 544 aaKnown RBP4.33□□□□□ -1.72
APP-207ENST00000415997 CDC37L1Q7L3B6 337 aa4.33□□□□□ -1.72
APP-207ENST00000415997 TOP6BLQ8N6T0 577 aa4.33□□□□□ -1.72
APP-207ENST00000415997 ZNF333Q96JL9 665 aa4.33□□□□□ -1.72
APP-207ENST00000415997 DUSP23Q9BVJ7 150 aa4.33□□□□□ -1.72
APP-207ENST00000415997 ADARB2Q9NS39 739 aaKnown RBP4.33□□□□□ -1.72
APP-207ENST00000415997 GPRC5DQ9NZD1 345 aa4.33□□□□□ -1.72
APP-207ENST00000415997 NARFQ9UHQ1 456 aa4.33□□□□□ -1.72
APP-207ENST00000415997 PCOLCE2Q9UKZ9 415 aa4.33□□□□□ -1.72
APP-207ENST00000415997 UNC79Q9P2D8 2635 aa4.32□□□□□ -1.72
APP-207ENST00000415997 RPTORQ8N122 1335 aa4.32□□□□□ -1.72
APP-207ENST00000415997 FKTNO75072 461 aa4.32□□□□□ -1.72
APP-207ENST00000415997 CPNE3O75131 537 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms