RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MTMR4Q9NYA4 1195 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 GNEQ9Y223 722 aaKnown RBP15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 MUC3AQ02505 3323 aa15.72■□□□□ 0.11
CTHRC1-202ENST00000415886 GRIN2DO15399 1336 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 TTLL1O95922 423 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 APPP05067 770 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 BMP3P12645 472 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 TDO2P48775 406 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 RABGGTBP53611 331 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 ITGA7Q13683 1181 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 SLFN13Q68D06 897 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 ZNF444Q8N0Y2 327 aaPredicted RBP15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 GMCL1P1Q8NEA9 526 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 APPBP2Q92624 585 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 CHMP4CQ96CF2 233 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 WNT8AQ9H1J5 351 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 A1CFQ9NQ94 594 aaKnown RBP15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 RNF146Q9NTX7 359 aa15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
CTHRC1-202ENST00000415886 ZNF536O15090 1300 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 TMEM232C9JQI7 657 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 M0R2C6 588 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 GPAA1O43292 621 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 B4GALT4O60513 344 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 CABYRO75952 493 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 MYOGP15173 224 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 SMPD1P17405 629 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 PSMC6P62333 389 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 FSCN1Q16658 493 aaKnown RBP15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 IL27Q8NEV9 243 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 AGBL1Q96MI9 1066 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 NOC4LQ9BVI4 516 aaKnown RBP15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 TRPV6Q9H1D0 765 aa15.7■□□□□ 0.1
CTHRC1-202ENST00000415886 DYNC1LI2O43237 492 aaPredicted RBP15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 GNAT2P19087 354 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 STAT2P52630 851 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 TMEM63BQ5T3F8 832 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 PPP2R2DQ66LE6 453 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 EEPD1Q7L9B9 569 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 FBXO16Q8IX29 292 aaPredicted RBP15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 EXOC6Q8TAG9 804 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 OTUD7AQ8TE49 926 aaPredicted RBP15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 NECAB3Q96P71 396 aaPredicted RBP15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 AP5M1Q9H0R1 490 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 PDGFCQ9NRA1 345 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 PLIN4Q96Q06 1357 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 TTC28Q96AY4 2481 aa15.69■□□□□ 0.1
CTHRC1-202ENST00000415886 ASB14A6NK59 587 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 TSPY3P0CV98 308 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 TSPY8P0CW00 308 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 FDX1P10109 184 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 SNAP25P60880 206 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 IKQ13123 557 aaPredicted RBP15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 VWCEQ96DN2 955 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 SCLYQ96I15 445 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 TRERF1Q96PN7 1200 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 ZNF287Q9HBT7 754 aa15.68■□□□□ 0.1
CTHRC1-202ENST00000415886 ZBBXA8MT70 800 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 ZEB2O60315 1214 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 ALAS1P13196 640 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 TFF2Q03403 129 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 MUM1L1Q5H9M0 696 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 TAPT1Q6NXT6 567 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 FAM160B2Q86V87 743 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 NEDD1Q8NHV4 660 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 PI4K2BQ8TCG2 481 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 NACAP1Q9BZK3 213 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 SLC4A7Q9Y6M7 1214 aa15.67■□□□□ 0.1
CTHRC1-202ENST00000415886 LCTP09848 1927 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 SLC1A4P43007 532 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 TFAP4Q01664 338 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 TKFCQ3LXA3 575 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 KCTD1Q719H9 257 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 RASGRP2Q7LDG7 609 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 IFNL3Q8IZI9 196 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 GMCL1Q96IK5 515 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 PURBQ96QR8 312 aaKnown RBP15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 LNPKQ9C0E8 428 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 PCDHA11Q9Y5I1 949 aa15.66■□□□□ 0.1
CTHRC1-202ENST00000415886 TRIM6-TRIM34B2RNG4 842 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 ATP2A2P16615 1042 aaKnown RBP15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 MCCP23508 829 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 PDE1AP54750 535 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 PDE4BQ07343 736 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 TTLL4Q14679 1199 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 IQSEC1Q6DN90 963 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 RPUSD2Q8IZ73 545 aaKnown RBP15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 CHURC1Q8WUH1 139 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 SEZ6LQ9BYH1 1024 aa15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 ALDH8A1Q9H2A2 487 aaPredicted RBP15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
CTHRC1-202ENST00000415886 TRMT13Q9NUP7 481 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms