RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ADGRE1Q14246 886 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
DDX56-202ENST00000415758 IQSEC1Q6DN90 963 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 TLK2Q86UE8 772 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 AGBL1Q96MI9 1066 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 HIPK3Q9H422 1215 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 RNF146Q9NTX7 359 aa18.31■□□□□ 0.52
DDX56-202ENST00000415758 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
DDX56-202ENST00000415758 SLC1A4P43007 532 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 TFAP4Q01664 338 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 FSCN1Q16658 493 aaKnown RBP18.3■□□□□ 0.52
DDX56-202ENST00000415758 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 TRERF1Q96PN7 1200 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 ASB2Q96Q27 587 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 AP5M1Q9H0R1 490 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 NCOR1O75376 2440 aa18.3■□□□□ 0.52
DDX56-202ENST00000415758 ZEB2O60315 1214 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 SLC3A2P08195 630 aaKnown RBP18.29■□□□□ 0.52
DDX56-202ENST00000415758 SMPD1P17405 629 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 TAPT1Q6NXT6 567 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
DDX56-202ENST00000415758 MORC4Q8TE76 937 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 SLC28A3Q9HAS3 691 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 THEGQ9P2T0 379 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 GBF1Q92538 1859 aa18.29■□□□□ 0.52
DDX56-202ENST00000415758 DYNC1LI2O43237 492 aaPredicted RBP18.28■□□□□ 0.52
DDX56-202ENST00000415758 MCCP23508 829 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 PPARAQ07869 468 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 TSHZ3Q63HK5 1081 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 RCSD1Q6JBY9 416 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 PPM1EQ8WY54 764 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
DDX56-202ENST00000415758 LRRC37A2A6NM11 1700 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 CHD7Q9P2D1 2997 aa18.28■□□□□ 0.52
DDX56-202ENST00000415758 UMODL1Q5DID0 1318 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 ALAS1P13196 640 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 MRPS5P82675 430 aaKnown RBP18.27■□□□□ 0.52
DDX56-202ENST00000415758 C20orf194Q5TEA3 1177 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 OTOP2Q7RTS6 562 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 RPUSD2Q8IZ73 545 aaKnown RBP18.27■□□□□ 0.52
DDX56-202ENST00000415758 VWCEQ96DN2 955 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
DDX56-202ENST00000415758 NAPBQ9H115 298 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 NKX2-4Q9H2Z4 354 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 PRR12Q9ULL5 1215 aa18.27■□□□□ 0.52
DDX56-202ENST00000415758 YBX2Q9Y2T7 364 aaKnown RBP18.27■□□□□ 0.52
DDX56-202ENST00000415758 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 B4GALT4O60513 344 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 NOVP48745 357 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 CCL23P55773 120 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 IKQ13123 557 aaPredicted RBP18.26■□□□□ 0.51
DDX56-202ENST00000415758 MUM1L1Q5H9M0 696 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 TRPV6Q9H1D0 765 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 WNT8AQ9H1J5 351 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 IL17RBQ9NRM6 502 aa18.26■□□□□ 0.51
DDX56-202ENST00000415758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDX56-202ENST00000415758 LCTP09848 1927 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 LOC102724159A0A0B4J2E5 919 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 IGFBP4P22692 258 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 PTGS1P23219 599 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 PWP2Q15269 919 aaKnown RBP18.25■□□□□ 0.51
DDX56-202ENST00000415758 ZMYM1Q5SVZ6 1142 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 KCTD1Q719H9 257 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 ISY1Q9ULR0 285 aaKnown RBP18.25■□□□□ 0.51
DDX56-202ENST00000415758 STX8Q9UNK0 236 aa18.25■□□□□ 0.51
DDX56-202ENST00000415758 DDX49Q9Y6V7 483 aaKnown RBP18.25■□□□□ 0.51
DDX56-202ENST00000415758 ERC2O15083 957 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 ICAM1P05362 532 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 COL9A1P20849 921 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 PSMC6P62333 389 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 CCDC85BQ15834 202 aaPredicted RBP18.24■□□□□ 0.51
DDX56-202ENST00000415758 DUSP28Q4G0W2 176 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 TMEM63BQ5T3F8 832 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 FBXO16Q8IX29 292 aaPredicted RBP18.24■□□□□ 0.51
DDX56-202ENST00000415758 PI4K2BQ8TCG2 481 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 ADAMTS19Q8TE59 1207 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 ALDH8A1Q9H2A2 487 aaPredicted RBP18.24■□□□□ 0.51
DDX56-202ENST00000415758 PCDHA11Q9Y5I1 949 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 SLC4A7Q9Y6M7 1214 aa18.24■□□□□ 0.51
DDX56-202ENST00000415758 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 FOXP2O15409 715 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 PFKMP08237 780 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 SUPT20HL2P0C7V6 817 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 ADD3Q9UEY8 706 aaKnown RBP18.23■□□□□ 0.51
DDX56-202ENST00000415758 CCPG1Q9ULG6 757 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 BDP1A6H8Y1 2624 aa18.23■□□□□ 0.51
DDX56-202ENST00000415758 XIRP2A4UGR9 3374 aa18.22■□□□□ 0.51
DDX56-202ENST00000415758 RBM47A0AV96 593 aaKnown RBP18.22■□□□□ 0.51
DDX56-202ENST00000415758 POU3F3P20264 500 aaPredicted RBP18.22■□□□□ 0.51
DDX56-202ENST00000415758 RABGGTBP53611 331 aa18.22■□□□□ 0.51
DDX56-202ENST00000415758 SNAP25P60880 206 aa18.22■□□□□ 0.51
DDX56-202ENST00000415758 BTNL9Q6UXG8 535 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms