RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 TTLL1O95922 423 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 LRRN4CLQ8ND94 238 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 ZNF397Q8NF99 534 aaPredicted RBP13.9□□□□□ -0.18
UBA3-203ENST00000415609 LRRC15Q8TF66 581 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 LRRC10BA6NIK2 292 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 MPHOSPH10O00566 681 aaKnown RBP13.9□□□□□ -0.18
UBA3-203ENST00000415609 PSMA7O14818 248 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 FANCGO15287 622 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 HMGB2P26583 209 aaKnown RBP13.9□□□□□ -0.18
UBA3-203ENST00000415609 ALDH1B1P30837 517 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 CASQ1P31415 396 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBA3-203ENST00000415609 ATP2B2Q01814 1243 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 CDC42EP5Q6NZY7 148 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 COL23A1Q86Y22 540 aaPredicted RBP13.9□□□□□ -0.18
UBA3-203ENST00000415609 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
UBA3-203ENST00000415609 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
UBA3-203ENST00000415609 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 SHMT1P34896 483 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 PDE6BP35913 854 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 TXKP42681 527 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 ORC2Q13416 577 aaPredicted RBP13.89□□□□□ -0.19
UBA3-203ENST00000415609 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 RAD9BQ6WBX8 426 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
UBA3-203ENST00000415609 MNS1Q8NEH6 495 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 NUP88Q99567 741 aaPredicted RBP13.89□□□□□ -0.19
UBA3-203ENST00000415609 EXOC1Q9NV70 894 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 COL11A2P13942 1736 aaPredicted RBP13.89□□□□□ -0.19
UBA3-203ENST00000415609 NRXN2Q9P2S2 1712 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
UBA3-203ENST00000415609 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
UBA3-203ENST00000415609 ASIC1P78348 528 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 CBX1P83916 185 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 UBXN1Q04323 297 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 SEMA3FQ13275 785 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 TRIM14Q14142 442 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 CALCRLQ16602 461 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 ERCC6LQ2NKX8 1250 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 WDR24Q96S15 920 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
UBA3-203ENST00000415609 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
UBA3-203ENST00000415609 PES1O00541 588 aaKnown RBP13.88□□□□□ -0.19
UBA3-203ENST00000415609 MMP10P09238 476 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 PDE4DQ08499 809 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 HHIPL2Q6UWX4 724 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 TRIM9Q9C026 710 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 MAGEC2Q9UBF1 373 aaPredicted RBP13.88□□□□□ -0.19
UBA3-203ENST00000415609 ADGRG1Q9Y653 693 aa13.88□□□□□ -0.19
UBA3-203ENST00000415609 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
UBA3-203ENST00000415609 TNNI2P48788 182 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 AMPD3Q01432 767 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 NFIAQ12857 509 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 TMEM266Q2M3C6 531 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 APOBEC3HQ6NTF7 200 aaKnown RBP13.87□□□□□ -0.19
UBA3-203ENST00000415609 FBXO38Q6PIJ6 1188 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 IRF2BP1Q8IU81 584 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 ADGRF4Q8IZF3 695 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 FEZ1Q99689 392 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 ABHD10Q9NUJ1 306 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 C10orf71Q711Q0 1435 aa13.87□□□□□ -0.19
UBA3-203ENST00000415609 SLC37A4O43826 429 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 TDP2O95551 362 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 CRKP46108 304 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 TTBK2Q6IQ55 1244 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 PPP1R18Q6NYC8 613 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.194e-6■□□□□ 8.2
UBA3-203ENST00000415609 DHTKD1Q96HY7 919 aaPredicted RBP13.86□□□□□ -0.19
UBA3-203ENST00000415609 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
UBA3-203ENST00000415609 CARD6Q9BX69 1037 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 LRWD1Q9UFC0 647 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 LGALS16A8MUM7 142 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 SLC16A2P36021 539 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 UBE2SQ16763 222 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 TTI2Q6NXR4 508 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 KCTD1Q719H9 257 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 CSGALNACT2Q8N6G5 542 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 NOC3LQ8WTT2 800 aaKnown RBP13.86□□□□□ -0.19
UBA3-203ENST00000415609 UBXN4Q92575 508 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 KIFC2Q96AC6 838 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 CDK5RAP3Q96JB5 506 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
UBA3-203ENST00000415609 RIC8AQ9NPQ8 531 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms