RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 PCDHA4Q9UN74 947 aa10.37□□□□□ -0.75
TRA2B-204ENST00000414862 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
TRA2B-204ENST00000414862 CCDC85CA6NKD9 419 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 DEFB115Q30KQ5 88 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 PNMA8AQ86V59 439 aaPredicted RBP10.36□□□□□ -0.75
TRA2B-204ENST00000414862 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
TRA2B-204ENST00000414862 AP4E1Q9UPM8 1137 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 PCDHGC5Q9Y5F6 944 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 SCN7AQ01118 1682 aa10.36□□□□□ -0.75
TRA2B-204ENST00000414862 WDR33Q9C0J8 1336 aaKnown RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 SCN11AQ9UI33 1791 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 RNMTO43148 476 aaKnown RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 EPHX2P34913 555 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 EIF4A3P38919 411 aaKnown RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 EIF5P55010 431 aaKnown RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 ID3Q02535 119 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 DYMQ7RTS9 669 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 CCDC84Q86UT8 332 aaPredicted RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 C2CD4AQ8NCU7 369 aaPredicted RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 MASTLQ96GX5 879 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 FAM46AQ96IP4 442 aaKnown RBP10.35□□□□□ -0.75
TRA2B-204ENST00000414862 IGSF5Q9NSI5 407 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 FER1L6Q2WGJ9 1857 aa10.35□□□□□ -0.75
TRA2B-204ENST00000414862 ZNF541Q9H0D2 1346 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 TMPRSS2O15393 492 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 GAS2O43903 313 aaKnown RBP10.34□□□□□ -0.75
TRA2B-204ENST00000414862 SRGNP10124 158 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 ECE1P42892 770 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 ZC3H12AQ5D1E8 599 aaKnown RBP10.34□□□□□ -0.75
TRA2B-204ENST00000414862 SNAP47Q5SQN1 464 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
TRA2B-204ENST00000414862 BNC2Q6ZN30 1099 aaPredicted RBP10.34□□□□□ -0.75
TRA2B-204ENST00000414862 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 GOLM1Q8NBJ4 401 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 CRIM1Q9NZV1 1036 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 DDX41Q9UJV9 622 aaKnown RBP10.34□□□□□ -0.75
TRA2B-204ENST00000414862 SCN4AP35499 1836 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 DICER1Q9UPY3 1922 aaKnown RBP10.34□□□□□ -0.75
TRA2B-204ENST00000414862 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
TRA2B-204ENST00000414862 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 IL13P35225 146 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 RACK1P63244 317 aaKnown RBP10.33□□□□□ -0.76
TRA2B-204ENST00000414862 UVSSAQ2YD98 709 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
TRA2B-204ENST00000414862 GPAT2Q6NUI2 795 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 ZNF296Q8WUU4 475 aaPredicted RBP10.33□□□□□ -0.76
TRA2B-204ENST00000414862 UTP4Q969X6 686 aaKnown RBP10.33□□□□□ -0.76
TRA2B-204ENST00000414862 TEX13AQ9BXU3 409 aaPredicted RBP10.33□□□□□ -0.76
TRA2B-204ENST00000414862 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
TRA2B-204ENST00000414862 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 ANKRD31Q8N7Z5 1873 aa10.33□□□□□ -0.76
TRA2B-204ENST00000414862 DCDC2CA8MYV0 355 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 F13A1P00488 732 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 GARTP22102 1010 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 IL6STP40189 918 aaPredicted RBP10.32□□□□□ -0.76
TRA2B-204ENST00000414862 GRM1Q13255 1194 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 INPP5AQ14642 412 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 NBPF5PQ86XG9 351 aaPredicted RBP10.32□□□□□ -0.76
TRA2B-204ENST00000414862 ZNF654Q8IZM8 581 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 ARMC10Q8N2F6 343 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 GATAD2BQ8WXI9 593 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 TP53INP1Q96A56 240 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 ELMO3Q96BJ8 720 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 CAPNS2Q96L46 248 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 KCNQ5Q9NR82 932 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 SUPT16HQ9Y5B9 1047 aaKnown RBP10.32□□□□□ -0.76
TRA2B-204ENST00000414862 CSADQ9Y600 493 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 ACTL7BQ9Y614 415 aa10.32□□□□□ -0.76
TRA2B-204ENST00000414862 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 MSTNO14793 375 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 NPR1P16066 1061 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 ERCC5P28715 1186 aaPredicted RBP10.31□□□□□ -0.76
TRA2B-204ENST00000414862 ASPAP45381 313 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 CDK8P49336 464 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 RGS19P49795 217 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 USP11P51784 963 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 ERVK-24P63145 666 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 TEFQ10587 303 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 LRFN4Q6PJG9 635 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.31□□□□□ -0.76
TRA2B-204ENST00000414862 C12orf40Q86WS4 652 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 RTKN2Q8IZC4 609 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 GPC2Q8N158 579 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 PLPPR2Q96GM1 343 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 MYRFLQ96LU7 910 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 FANCD2OSQ96PS1 177 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 ATXN3LQ9H3M9 355 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 PANK3Q9H999 370 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 DDX21Q9NR30 783 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRA2B-204ENST00000414862 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 TPSG1Q9NRR2 321 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 ZNF652Q9Y2D9 606 aa10.31□□□□□ -0.76
TRA2B-204ENST00000414862 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.31□□□□□ -0.76
TRA2B-204ENST00000414862 THSD7BQ9C0I4 1608 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms