RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 CNGA1P29973 690 aa29.42■■■□□ 2.3
CPNE1-207ENST00000414664 CCND3P30281 292 aaPredicted RBP29.42■■■□□ 2.3
CPNE1-207ENST00000414664 QRICH1Q2TAL8 776 aa29.42■■■□□ 2.3
CPNE1-207ENST00000414664 BLOC1S2Q6QNY1 142 aa29.42■■■□□ 2.3
CPNE1-207ENST00000414664 NSMFQ6X4W1 530 aa29.42■■■□□ 2.3
CPNE1-207ENST00000414664 MSCO60682 206 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 CYBAP13498 195 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 GNAQP50148 359 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 FGD1P98174 961 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 TRAF1Q13077 416 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 USH1GQ495M9 461 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 FBXO11Q86XK2 927 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 LZTS2Q9BRK4 669 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 CRISPLD2Q9H0B8 497 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 RIOX1Q9H6W3 641 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 CYP39A1Q9NYL5 469 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 ABCB11O95342 1321 aa29.41■■■□□ 2.3
CPNE1-207ENST00000414664 MAMDC4Q6UXC1 1216 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 FAM133AQ8N9E0 248 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 SHISA4Q96DD7 197 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 MTMR8Q96EF0 704 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 MYL10Q9BUA6 226 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 AMNQ9BXJ7 453 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 MAF1Q9H063 256 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 CNPY2Q9Y2B0 182 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 SYNGAP1Q96PV0 1343 aa29.4■■■□□ 2.3
CPNE1-207ENST00000414664 ZBTB5O15062 677 aa29.39■■■□□ 2.3
CPNE1-207ENST00000414664 TAL1P17542 331 aaPredicted RBP29.39■■■□□ 2.3
CPNE1-207ENST00000414664 SMARCA1P28370 1054 aa29.39■■■□□ 2.3
CPNE1-207ENST00000414664 CLEC4DQ8WXI8 215 aa29.39■■■□□ 2.3
CPNE1-207ENST00000414664 TCEANC2Q96MN5 208 aa29.39■■■□□ 2.3
CPNE1-207ENST00000414664 SMCHD1A6NHR9 2005 aa29.38■■■□□ 2.29
CPNE1-207ENST00000414664 NFIBO00712 420 aa29.38■■■□□ 2.29
CPNE1-207ENST00000414664 CNTN2Q02246 1040 aa29.38■■■□□ 2.29
CPNE1-207ENST00000414664 RGS22Q8NE09 1264 aa29.38■■■□□ 2.29
CPNE1-207ENST00000414664 TRPV1Q8NER1 839 aa29.38■■■□□ 2.29
CPNE1-207ENST00000414664 MRPL11Q9Y3B7 192 aaKnown RBP29.38■■■□□ 2.29
CPNE1-207ENST00000414664 PTPDC1A2A3K4 754 aa29.37■■■□□ 2.29
CPNE1-207ENST00000414664 ASB14A6NK59 587 aa29.37■■■□□ 2.29
CPNE1-207ENST00000414664 BAATQ14032 418 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-207ENST00000414664 RNF207Q6ZRF8 634 aa29.37■■■□□ 2.29
CPNE1-207ENST00000414664 FANCBQ8NB91 859 aa29.37■■■□□ 2.29
CPNE1-207ENST00000414664 DDX20Q9UHI6 824 aaKnown RBP29.37■■■□□ 2.29
CPNE1-207ENST00000414664 OGDHLQ9ULD0 1010 aa29.37■■■□□ 2.29
CPNE1-207ENST00000414664 MYH6P13533 1939 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 SEPT4O43236 478 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 CASTP20810 708 aaKnown RBP29.36■■■□□ 2.29
CPNE1-207ENST00000414664 RPS6KB1P23443 525 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 PRAMEF19Q5SWL8 479 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 HOMER1Q86YM7 354 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 MCF2L2Q86YR7 1114 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 ANKLE1Q8NAG6 615 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 FGD4Q96M96 766 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 SPZ1Q9BXG8 430 aa29.36■■■□□ 2.29
CPNE1-207ENST00000414664 ADD3Q9UEY8 706 aaKnown RBP29.36■■■□□ 2.29
CPNE1-207ENST00000414664 CYTH3O43739 400 aa29.35■■■□□ 2.29
CPNE1-207ENST00000414664 LHX8Q68G74 356 aa29.35■■■□□ 2.29
CPNE1-207ENST00000414664 APOA5Q6Q788 366 aa29.35■■■□□ 2.29
CPNE1-207ENST00000414664 MICU3Q86XE3 530 aa29.35■■■□□ 2.29
CPNE1-207ENST00000414664 PIGSQ96S52 555 aa29.35■■■□□ 2.29
CPNE1-207ENST00000414664 PNMA6FA0A0J9YX94 578 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 SOWAHBA6NEL2 793 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 ZBTB43O43298 467 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 CPA1P15085 419 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 RXRAP19793 462 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 Q6ZUG5 572 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 ARMCX2Q7L311 632 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 CCDC144CPQ8IYA2 1237 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 ABHD16BQ9H3Z7 469 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.34■■■□□ 2.29
CPNE1-207ENST00000414664 PCDHA1Q9Y5I3 950 aa29.34■■■□□ 2.29
CPNE1-207ENST00000414664 FARP2O94887 1054 aaPredicted RBP29.33■■■□□ 2.29
CPNE1-207ENST00000414664 SNAI1O95863 264 aaPredicted RBP29.33■■■□□ 2.29
CPNE1-207ENST00000414664 CALML3P27482 149 aa29.33■■■□□ 2.29
CPNE1-207ENST00000414664 RPS6P62753 249 aaKnown RBP29.33■■■□□ 2.29
CPNE1-207ENST00000414664 SLC35G1Q2M3R5 365 aa29.33■■■□□ 2.29
CPNE1-207ENST00000414664 FBXL16Q8N461 479 aa29.33■■■□□ 2.29
CPNE1-207ENST00000414664 RRP36Q96EU6 259 aaKnown RBP29.33■■■□□ 2.29
CPNE1-207ENST00000414664 TM6SF1Q9BZW5 370 aa29.33■■■□□ 2.29
CPNE1-207ENST00000414664 RBM28Q9NW13 759 aaKnown RBP29.33■■■□□ 2.29
CPNE1-207ENST00000414664 LOC102724159A0A0B4J2E5 919 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 KLF18A0A0U1RQI7 1052 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 RCAN1P53805 252 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 PWP2Q15269 919 aaKnown RBP29.32■■■□□ 2.28
CPNE1-207ENST00000414664 RUFY3Q7L099 469 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 RAB11FIP4Q86YS3 637 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 MPHOSPH6Q99547 160 aaKnown RBP29.32■■■□□ 2.28
CPNE1-207ENST00000414664 ZSWIM6Q9HCJ5 1215 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 SEC63Q9UGP8 760 aaKnown RBP29.32■■■□□ 2.28
CPNE1-207ENST00000414664 BRPF3Q9ULD4 1205 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 CYP46A1Q9Y6A2 500 aa29.32■■■□□ 2.28
CPNE1-207ENST00000414664 ZNF865P0CJ78 1059 aaPredicted RBP29.31■■■□□ 2.28
CPNE1-207ENST00000414664 SLC30A10Q6XR72 485 aa29.31■■■□□ 2.28
CPNE1-207ENST00000414664 SRBD1Q8N5C6 995 aaKnown RBP29.31■■■□□ 2.28
CPNE1-207ENST00000414664 ZHX1Q9UKY1 873 aaPredicted RBP29.31■■■□□ 2.28
CPNE1-207ENST00000414664 BRCA2P51587 3418 aa29.3■■■□□ 2.28
CPNE1-207ENST00000414664 B4DLN1 442 aa29.3■■■□□ 2.28
CPNE1-207ENST00000414664 PPP1R11O60927 126 aaPredicted RBP29.3■■■□□ 2.28
CPNE1-207ENST00000414664 PLEKHA8P1O95397 391 aa29.3■■■□□ 2.28
CPNE1-207ENST00000414664 AKR1A1P14550 325 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms