RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 TTF1Q15361 905 aaPredicted RBP9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 ZNF792Q3KQV3 632 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 RNF180Q86T96 592 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 REPS2Q8NFH8 660 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 TINF2Q9BSI4 451 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 SWAP70Q9UH65 585 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 NRBP1Q9UHY1 535 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 TACC3Q9Y6A5 838 aa9.89□□□□□ -0.83
UPF3AP1-201ENST00000413731 MUC3AQ02505 3323 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 MBD4O95243 580 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 SLC25A27O95847 323 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 CHGBP05060 677 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 FAAP100Q0VG06 881 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 HDAC1Q13547 482 aaPredicted RBP9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 KCTD2Q14681 263 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 RIOX2Q8IUF8 465 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 RWDD1Q9H446 243 aaPredicted RBP9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 SH2D4AQ9H788 454 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 TMEM39AQ9NV64 488 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 ZNF214Q9UL59 606 aaPredicted RBP9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 ADAMTS5Q9UNA0 930 aa9.88□□□□□ -0.83
UPF3AP1-201ENST00000413731 VWA5AO00534 786 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 ADCY6O43306 1168 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 EEF2P13639 858 aaKnown RBP9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 ADD2P35612 726 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 STAT3P40763 770 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 CDK8P49336 464 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 TJAP1Q5JTD0 557 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 C16orf86Q6ZW13 317 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 ANKRD33Q7Z3H0 272 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 TIFAQ96CG3 184 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 ZNF576Q9H609 170 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 STARD7Q9NQZ5 370 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 ECHDC1Q9NTX5 307 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 ZHX1Q9UKY1 873 aaPredicted RBP9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 TBX21Q9UL17 535 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 CNPY2Q9Y2B0 182 aa9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 DIS3Q9Y2L1 958 aaKnown RBP9.87□□□□□ -0.83
UPF3AP1-201ENST00000413731 GRXCR1A8MXD5 290 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 PBX2P40425 430 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 ACLYP53396 1101 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 SCN5AQ14524 2016 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 ARSIQ5FYB1 569 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 ANKRD45Q5TZF3 282 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 TSHZ3Q63HK5 1081 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 CCSAPQ6IQ19 270 aaPredicted RBP9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 CCDC17Q96LX7 622 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 TOX2Q96NM4 488 aa9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 NUP88Q99567 741 aaPredicted RBP9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
UPF3AP1-201ENST00000413731 SYNGAP1Q96PV0 1343 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 DCDC2CA8MYV0 355 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 USP17L12C9JPN9 530 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 USP17L21D6R901 530 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 KDM4AO75164 1064 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 SNAI1O95863 264 aaPredicted RBP9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 TIMP1P01033 207 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 ATP5JP18859 108 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 COL9A1P20849 921 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 CST5P28325 142 aaPredicted RBP9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 COPB2P35606 906 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 KCNA10Q16322 511 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 C12orf60Q5U649 245 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 SNRNP48Q6IEG0 339 aaKnown RBP9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 RGS22Q8NE09 1264 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 KLHDC9Q8NEP7 349 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 FGD4Q96M96 766 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 PBX4Q9BYU1 374 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 KANSL2Q9H9L4 492 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 ATP8A2Q9NTI2 1148 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 RAPGEFL1Q9UHV5 662 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 RIPK3Q9Y572 518 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 TANC1Q9C0D5 1861 aa9.85□□□□□ -0.83
UPF3AP1-201ENST00000413731 TTC41PQ6P2S7 1318 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 TNFRSF10AO00220 468 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 ERC2O15083 957 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 CENPBP07199 599 aaPredicted RBP9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 CSF2RAP15509 400 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 MX1P20591 662 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 PPIGQ13427 754 aaKnown RBP eCLIP9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 PPP4R3BQ5MIZ7 849 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 TMEM240Q5SV17 173 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 RASIP1Q5U651 963 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 B4GALNT3Q6L9W6 998 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 MFSD5Q6N075 450 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 C16orf59Q7L2K0 433 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms