RNA–Protein interactions for RNA: ENST00000412770.6

PPP6R1-201, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-201ENST00000412770 MTMR2Q13614 643 aa18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 KARSQ15046 597 aaKnown RBP18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 RMND1Q9NWS8 449 aa18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 MYH13Q9UKX3 1938 aa18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 VEGFAP15692 232 aaPredicted RBP18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 TSR1Q2NL82 804 aaKnown RBP18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 CBX8Q9HC52 389 aa18.55■□□□□ 0.56
PPP6R1-201ENST00000412770 GPC2Q8N158 579 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 ZKSCAN4Q969J2 545 aaPredicted RBP18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 ANO3Q9BYT9 981 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 PCDHA6Q9UN73 950 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 PCDHA8Q9Y5H6 950 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 BAZ2AQ9UIF9 1905 aaKnown RBP18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 DDX39AO00148 427 aaKnown RBP18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 CYTH3O43739 400 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 HMGCS2P54868 508 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 FKBP1CQ5VVH2 108 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 PRR12Q9ULL5 1215 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 SH3BP5LQ7L8J4 393 aa18.54■□□□□ 0.56
PPP6R1-201ENST00000412770 FBXO28Q9NVF7 368 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 LONP1P36776 959 aaKnown RBP18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 GRAMD1CQ8IYS0 662 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 FEM1BQ9UK73 627 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 MAPK8IP1Q9UQF2 711 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 ROBO3Q96MS0 1386 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 CBFA2T2O43439 604 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 LONRF3Q496Y0 759 aa18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 NOM1Q5C9Z4 860 aaKnown RBP18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 ZFP91Q96JP5 570 aaPredicted RBP18.53■□□□□ 0.56
PPP6R1-201ENST00000412770 MCTP2Q6DN12 878 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 SV2BQ7L1I2 683 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 RAVER2Q9HCJ3 691 aaKnown RBP18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 PCDHA5Q9Y5H7 936 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 ZNF831Q5JPB2 1677 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 PRPF38AQ8NAV1 312 aaKnown RBP18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 GPRC5DQ9NZD1 345 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 FZD1Q9UP38 647 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 COL4A1P02462 1669 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 RREB1Q92766 1687 aa18.52■□□□□ 0.56
PPP6R1-201ENST00000412770 NPM3O75607 178 aaKnown RBP18.52■□□□□ 0.55
PPP6R1-201ENST00000412770 ARMC9Q7Z3E5 817 aa18.52■□□□□ 0.55
PPP6R1-201ENST00000412770 LRRC27Q9C0I9 530 aa18.52■□□□□ 0.55
PPP6R1-201ENST00000412770 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.55
PPP6R1-201ENST00000412770 CTNND1O60716 968 aaKnown RBP18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 SMARCA1P28370 1054 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 SHC4Q6S5L8 630 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 MMP14P50281 582 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 MKRN3Q13064 507 aaKnown RBP18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 MCF2L2Q86YR7 1114 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 OTUD5Q96G74 571 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 ZMYND12Q9H0C1 365 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 NLRP12P59046 1061 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 TRPM4Q8TD43 1214 aa18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 SMCR8Q8TEV9 937 aaPredicted RBP18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.51■□□□□ 0.55
PPP6R1-201ENST00000412770 RESP18Q5W5W9 173 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 PPP1R18Q6NYC8 613 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 PLA2G4DQ86XP0 818 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 RPAP3Q9H6T3 665 aaPredicted RBP18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 MYH2Q9UKX2 1941 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 LAD1O00515 517 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 TDP2O95551 362 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 HAUS3Q68CZ6 603 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 DYMQ7RTS9 669 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 TMX2Q9Y320 296 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 ASTN2O75129 1339 aaPredicted RBP18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 MYH7P12883 1935 aa18.5■□□□□ 0.55
PPP6R1-201ENST00000412770 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 RIC8AQ9NPQ8 531 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 TBCAO75347 108 aaKnown RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 GCFC2P16383 781 aaKnown RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 RAD51AP2Q09MP3 1159 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 FSD2A1L4K1 749 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 GAS7O60861 476 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 EGFRP00533 1210 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 TOB1P50616 345 aaPredicted RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 EARS2Q5JPH6 523 aaKnown RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 ARHGEF16Q5VV41 709 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 ARL6IP4Q66PJ3 421 aaKnown RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 LDHDQ86WU2 507 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 ANKRD35Q8N283 1001 aa18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
PPP6R1-201ENST00000412770 PSMA7O14818 248 aa18.48■□□□□ 0.55
PPP6R1-201ENST00000412770 MYL5Q02045 173 aa18.48■□□□□ 0.55
PPP6R1-201ENST00000412770 GRIN1Q05586 938 aa18.48■□□□□ 0.55
PPP6R1-201ENST00000412770 FUT2Q10981 343 aa18.48■□□□□ 0.55
PPP6R1-201ENST00000412770 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms