RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 NID2Q14112 1375 aa16.2■□□□□ 0.18
CPNE1-206ENST00000412056 CNTNAP5Q8WYK1 1306 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 NFIBO00712 420 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 ZBTB5O15062 677 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 PGK2P07205 417 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 GRK4P32298 578 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 AK2P54819 239 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 CCL14Q16627 93 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 SLC9C1Q4G0N8 1177 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 FBXO11Q86XK2 927 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 TRIB2Q92519 343 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 ABHD8Q96I13 439 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
CPNE1-206ENST00000412056 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
CPNE1-206ENST00000412056 A1CFQ9NQ94 594 aaKnown RBP16.19■□□□□ 0.18
CPNE1-206ENST00000412056 HOXC6P09630 235 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
CPNE1-206ENST00000412056 SMARCA1P28370 1054 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
CPNE1-206ENST00000412056 NEK4P51957 841 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 NSMFQ6X4W1 530 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
CPNE1-206ENST00000412056 DPP9Q86TI2 863 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 PXYLP1Q8TE99 480 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 FLRT1Q9NZU1 646 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 PNMA2Q9UL42 364 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 ABCB11O95342 1321 aa16.18■□□□□ 0.18
CPNE1-206ENST00000412056 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 DNAJC25-GNG10A0A024R161 153 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 hCG_1642624A0A1W2PR95 340 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
CPNE1-206ENST00000412056 CCT2P78371 535 aaKnown RBP16.17■□□□□ 0.18
CPNE1-206ENST00000412056 FUT2Q10981 343 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 ANKRD35Q8N283 1001 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 ARMC5Q96C12 935 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
CPNE1-206ENST00000412056 TBC1D32Q96NH3 1257 aa16.17■□□□□ 0.18
CPNE1-206ENST00000412056 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-206ENST00000412056 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
CPNE1-206ENST00000412056 HMGCRP04035 888 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 INHAP05111 366 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 TRIM32Q13049 653 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 STK3Q13188 491 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 ZNF792Q3KQV3 632 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 SLC30A10Q6XR72 485 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 ZNF274Q96GC6 653 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-206ENST00000412056 MAML3Q96JK9 1138 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 FGD4Q96M96 766 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 CYP39A1Q9NYL5 469 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 BIN2Q9UBW5 565 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-206ENST00000412056 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 PCDHA1Q9Y5I3 950 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 PFASO15067 1338 aa16.16■□□□□ 0.18
CPNE1-206ENST00000412056 CCDC196A0A1B0GTZ2 297 aa16.15■□□□□ 0.18
CPNE1-206ENST00000412056 LARGE1O95461 756 aa16.15■□□□□ 0.18
CPNE1-206ENST00000412056 MYCP01106 439 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-206ENST00000412056 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-206ENST00000412056 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
CPNE1-206ENST00000412056 ANKRD1Q15327 319 aa16.15■□□□□ 0.18
CPNE1-206ENST00000412056 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
CPNE1-206ENST00000412056 ZNF333Q96JL9 665 aa16.15■□□□□ 0.18
CPNE1-206ENST00000412056 SLC5A4Q9NY91 659 aa16.15■□□□□ 0.18
CPNE1-206ENST00000412056 SEC63Q9UGP8 760 aaKnown RBP16.15■□□□□ 0.18
CPNE1-206ENST00000412056 MRPL11Q9Y3B7 192 aaKnown RBP16.15■□□□□ 0.18
CPNE1-206ENST00000412056 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 OPLAHO14841 1288 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 MTFR1Q15390 333 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 TBC1D5Q92609 795 aa16.14■□□□□ 0.17
CPNE1-206ENST00000412056 PURBQ96QR8 312 aaKnown RBP16.14■□□□□ 0.17
CPNE1-206ENST00000412056 KIAA0100Q14667 2235 aaKnown RBP16.13■□□□□ 0.17
CPNE1-206ENST00000412056 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
CPNE1-206ENST00000412056 IGHA2P01877 340 aa16.13■□□□□ 0.17
CPNE1-206ENST00000412056 UBXN2AP68543 259 aa16.13■□□□□ 0.17
CPNE1-206ENST00000412056 NTRK3Q16288 839 aa16.13■□□□□ 0.17
CPNE1-206ENST00000412056 RNF207Q6ZRF8 634 aa16.13■□□□□ 0.17
CPNE1-206ENST00000412056 GPKOWQ92917 476 aaPredicted RBP eCLIP16.13■□□□□ 0.17
CPNE1-206ENST00000412056 DIS3Q9Y2L1 958 aaKnown RBP16.13■□□□□ 0.17
CPNE1-206ENST00000412056 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-206ENST00000412056 ASTN1O14525 1302 aa16.13■□□□□ 0.17
CPNE1-206ENST00000412056 SOWAHBA6NEL2 793 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
CPNE1-206ENST00000412056 CALML3P27482 149 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 CYP2C19P33261 490 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 RPS6P62753 249 aaKnown RBP16.12■□□□□ 0.17
CPNE1-206ENST00000412056 CACNB2Q08289 660 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-206ENST00000412056 SCRN1Q12765 414 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 RABEP1Q15276 862 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
CPNE1-206ENST00000412056 PHKBQ93100 1093 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms