RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CBFA2T3O75081 653 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 GUCY1B3Q02153 619 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 FKBP4Q02790 459 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RUNX1T1Q06455 604 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 KCNA1Q09470 495 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SPDYE2Q495Y8 402 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 LARP1BQ659C4 914 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 OLFML2BQ68BL8 750 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 ZNF544Q6NX49 715 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 MOSPD2Q8NHP6 518 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 TNPO1Q92973 898 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CIDECQ96AQ7 238 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RNF31Q96EP0 1072 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 ZFP91Q96JP5 570 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 BACH2Q9BYV9 841 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 GPC4O75487 556 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 HLA-DRAP01903 254 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 UBA1P22314 1058 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SPIRE1Q08AE8 756 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 PUM3Q15397 648 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CHMP1BQ7LBR1 199 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SESTD1Q86VW0 696 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RB1CC1Q8TDY2 1594 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 USP33Q8TEY7 942 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SENP3Q9H4L4 574 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 A0A1W2PRG6 482 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 TBC1D4O60343 1298 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 BMP15O95972 392 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RPN2P04844 631 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 MCM7P33993 719 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CCT8P50990 548 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RPS6KA3P51812 740 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 PKN1Q16512 942 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SIN3AQ96ST3 1273 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 ASPSCR1Q9BZE9 553 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SERPINB13Q9UIV8 391 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SLC12A7Q9Y666 1083 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SAGE2PA6NJ88 616 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 PTGES3LE9PB15 166 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SYT1P21579 422 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 XPAP23025 273 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 ABCE1P61221 599 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 AP2B1P63010 937 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 EFTUD2Q15029 972 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 NUDCD1Q96RS6 583 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SRPK1Q96SB4 655 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 ZBTB18Q99592 522 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 LSG1Q9H089 658 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 KLC2Q9H0B6 622 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 G3BP2Q9UN86 482 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 PSMD12O00232 456 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 BTN3A3O00478 584 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 STX7O15400 261 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 MAN1A1P33908 653 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SOX6P35712 828 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 GNG11P61952 73 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 OLR1P78380 273 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 FAM45BPQ6NSW5 357 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 NGDNQ8NEJ9 315 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 B4GALNT2Q8NHY0 566 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 VPS35Q96QK1 796 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 NUP58Q9BVL2 599 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 ADAM30Q9UKF2 790 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 MTSS1O43312 755 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SERPINB1P30740 379 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 FCHO2Q0JRZ9 810 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC144BQ3MJ40 725 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 ELMSAN1Q6PJG2 1045 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SUN2Q9UH99 717 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 BAIAP2L1Q9UHR4 511 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 NUTM2BA6NNL0 878 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 NUTM2EB1AL46 878 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 MYO1CO00159 1063 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 PARNO95453 639 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 XRCC5P13010 732 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 STAT2P52630 851 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 TTLL12Q14166 644 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 RIC3Q7Z5B4 369 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 CRACR2BQ8N4Y2 399 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 BBS1Q8NFJ9 593 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 ZNF483Q8TF39 744 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 TP53INP1Q96A56 240 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 OXCT2Q9BYC2 517 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 ING2Q9H160 280 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC194A0A1B0GVG4 234 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 TLDC2A0PJX2 215 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 TYW5A2RUC4 315 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 ERN1O75460 977 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 CHEK2O96017 543 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SRGAP2BP0DMP2 458 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 GJA8P48165 433 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 MPP2Q14168 576 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 AARS2Q5JTZ9 985 aaKnown RBP4.98□□□□□ -1.61
PTPN13-202ENST00000411767 ARMC3Q5W041 872 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 FCHSD1Q86WN1 690 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 RNF169Q8NCN4 708 aa4.98□□□□□ -1.61
PTPN13-202ENST00000411767 SH3GLB1Q9Y371 365 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms