RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 TFRCP02786 760 aaKnown RBP19.01■□□□□ 0.63
NOD1-202ENST00000411552 CNTN2Q02246 1040 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 QRICH1Q2TAL8 776 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 USH1GQ495M9 461 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 PRAMEF19Q5SWL8 479 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 NSMFQ6X4W1 530 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 FAM133AQ8N9E0 248 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 CLEC4DQ8WXI8 215 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 FGD4Q96M96 766 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
NOD1-202ENST00000411552 CYP39A1Q9NYL5 469 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 LCTP09848 1927 aa19.01■□□□□ 0.63
NOD1-202ENST00000411552 POTEB2H3BUK9 544 aa19■□□□□ 0.63
NOD1-202ENST00000411552 HMGB1P09429 215 aaKnown RBP19■□□□□ 0.63
NOD1-202ENST00000411552 CPA1P15085 419 aa19■□□□□ 0.63
NOD1-202ENST00000411552 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
NOD1-202ENST00000411552 SGMS1Q86VZ5 419 aa19■□□□□ 0.63
NOD1-202ENST00000411552 MTMR8Q96EF0 704 aa19■□□□□ 0.63
NOD1-202ENST00000411552 MAP3K14Q99558 947 aa19■□□□□ 0.63
NOD1-202ENST00000411552 PDE4DIPQ5VU43 2346 aa19■□□□□ 0.63
NOD1-202ENST00000411552 FRMPD3Q5JV73 1810 aa19■□□□□ 0.63
NOD1-202ENST00000411552 CNGA1P29973 690 aa18.99■□□□□ 0.63
NOD1-202ENST00000411552 LHX8Q68G74 356 aa18.99■□□□□ 0.63
NOD1-202ENST00000411552 MAMDC4Q6UXC1 1216 aa18.99■□□□□ 0.63
NOD1-202ENST00000411552 MSL3Q8N5Y2 521 aaKnown RBP18.99■□□□□ 0.63
NOD1-202ENST00000411552 CTCFLQ8NI51 663 aaPredicted RBP18.99■□□□□ 0.63
NOD1-202ENST00000411552 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
NOD1-202ENST00000411552 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
NOD1-202ENST00000411552 SYNGAP1Q96PV0 1343 aa18.99■□□□□ 0.63
NOD1-202ENST00000411552 SOWAHBA6NEL2 793 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 CYTH3O43739 400 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 CAPN2P17655 700 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 RXRAP19793 462 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 KIF5BP33176 963 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 BAATQ14032 418 aaPredicted RBP18.98■□□□□ 0.63
NOD1-202ENST00000411552 FBXO11Q86XK2 927 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 RAB11FIP4Q86YS3 637 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 DDX20Q9UHI6 824 aaKnown RBP18.98■□□□□ 0.63
NOD1-202ENST00000411552 NRBP1Q9UHY1 535 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 OGDHLQ9ULD0 1010 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 ASTN1O14525 1302 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 ABCB11O95342 1321 aa18.98■□□□□ 0.63
NOD1-202ENST00000411552 PTPDC1A2A3K4 754 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 ZBTB5O15062 677 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 PPP1R11O60927 126 aaPredicted RBP18.97■□□□□ 0.63
NOD1-202ENST00000411552 FARP2O94887 1054 aaPredicted RBP18.97■□□□□ 0.63
NOD1-202ENST00000411552 SNAI1O95863 264 aaPredicted RBP18.97■□□□□ 0.63
NOD1-202ENST00000411552 CALM1P0DP23 149 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 CALM2P0DP24 149 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 CALM3P0DP25 149 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 BLOC1S2Q6QNY1 142 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 SLC30A10Q6XR72 485 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 UBE2Q1Q7Z7E8 422 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 CCDC144CPQ8IYA2 1237 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 PURBQ96QR8 312 aaKnown RBP18.97■□□□□ 0.63
NOD1-202ENST00000411552 PIGSQ96S52 555 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
NOD1-202ENST00000411552 SEPT4O43236 478 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 CASTP20810 708 aaKnown RBP18.96■□□□□ 0.63
NOD1-202ENST00000411552 APOA5Q6Q788 366 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 RNF207Q6ZRF8 634 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 ARMCX2Q7L311 632 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 MICU3Q86XE3 530 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 AMNQ9BXJ7 453 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 BRPF3Q9ULD4 1205 aa18.96■□□□□ 0.63
NOD1-202ENST00000411552 MSCO60682 206 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 PLEKHA8P1O95397 391 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 ZNF865P0CJ78 1059 aaPredicted RBP18.95■□□□□ 0.62
NOD1-202ENST00000411552 RPS6KB1P23443 525 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 CALML3P27482 149 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 PSMA5P28066 241 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 RPS6P62753 249 aaKnown RBP18.95■□□□□ 0.62
NOD1-202ENST00000411552 SYNE3Q6ZMZ3 975 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 ANKLE1Q8NAG6 615 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 FANCBQ8NB91 859 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 RGS22Q8NE09 1264 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 LZTS2Q9BRK4 669 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 SPZ1Q9BXG8 430 aa18.95■□□□□ 0.62
NOD1-202ENST00000411552 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.95■□□□□ 0.62
NOD1-202ENST00000411552 MRPL11Q9Y3B7 192 aaKnown RBP18.95■□□□□ 0.62
NOD1-202ENST00000411552 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
NOD1-202ENST00000411552 PNMA6FA0A0J9YX94 578 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 SMARCA1P28370 1054 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 GNAQP50148 359 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 MNX1P50219 401 aaPredicted RBP18.94■□□□□ 0.62
NOD1-202ENST00000411552 FGD1P98174 961 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 ANO1Q5XXA6 986 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 Q6ZUG5 572 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 CMTR1Q8N1G2 835 aaKnown RBP18.94■□□□□ 0.62
NOD1-202ENST00000411552 SRBD1Q8N5C6 995 aaKnown RBP18.94■□□□□ 0.62
NOD1-202ENST00000411552 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
NOD1-202ENST00000411552 PIBF1Q8WXW3 757 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 PCDHA1Q9Y5I3 950 aa18.94■□□□□ 0.62
NOD1-202ENST00000411552 DNAH12Q6ZR08 3092 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 KLF18A0A0U1RQI7 1052 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 ASB14A6NK59 587 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 ZBTB43O43298 467 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 TMTC3Q6ZXV5 915 aa18.93■□□□□ 0.62
NOD1-202ENST00000411552 TBC1D5Q92609 795 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms