RNA–Protein interactions for RNA: ENST00000411341.1

RN7SKP172-201, Transcript of RNA, 7SK small nuclear pseudogene 172, humanhuman

BASIC

Gene RN7SKP172, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP172-201ENST00000411341 IGHDP01880 384 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 CALML3P27482 149 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 GJA9P57773 515 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 FPGSQ05932 587 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 BTNL9Q6UXG8 535 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 RNF207Q6ZRF8 634 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 FAM133AQ8N9E0 248 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 KLHDC9Q8NEP7 349 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 UBAC1Q9BSL1 405 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 SEZ6LQ9BYH1 1024 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 CNNM2Q9H8M5 875 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 CYP39A1Q9NYL5 469 aa11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
RN7SKP172-201ENST00000411341 ZNF536O15090 1300 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 KDM4AO75164 1064 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 PDE4DQ08499 809 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 BAATQ14032 418 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 EEPD1Q7L9B9 569 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 TMEM199Q8N511 208 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 VTA1Q9NP79 307 aa11.87□□□□□ -0.51
RN7SKP172-201ENST00000411341 RAD50Q92878 1312 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 ERICH2A1L162 156 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 TRIM43BA6NCK2 446 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 ARVCFO00192 962 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 KIAA0355O15063 1070 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 PDHBP11177 359 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 NOVP48745 357 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 ZNF543Q08ER8 600 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 SHHQ15465 462 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 MUM1L1Q5H9M0 696 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 TRIM43Q96BQ3 446 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 RNPC3Q96LT9 517 aaKnown RBP11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 UPF3AQ9H1J1 476 aaKnown RBP11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 Q9Y3F1 56 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 RLFQ13129 1914 aa11.86□□□□□ -0.51
RN7SKP172-201ENST00000411341 TIMP1P01033 207 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 CPT1AP50416 773 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 BEX3Q00994 111 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 FAAP100Q0VG06 881 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 USH1GQ495M9 461 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 Q7L0L9 218 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 MCF2L2Q86YR7 1114 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 TBC1D10CQ8IV04 446 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 MTIF3Q9H2K0 278 aaKnown RBP11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 STXBP5LQ9Y2K9 1186 aa11.85□□□□□ -0.51
RN7SKP172-201ENST00000411341 GREB1LQ9C091 1923 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 BRCA2P51587 3418 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 MYADML2A6NDP7 307 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 B4E1Z4 1266 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 SMPD1P17405 629 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 ALDH5A1P51649 535 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 TRAF1Q13077 416 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 ASPRV1Q53RT3 343 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 IFIT1BQ5T764 474 aaKnown RBP11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 CXCL17Q6UXB2 119 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 FBXO16Q8IX29 292 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 FAM161BQ96MY7 647 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 MTMR10Q9NXD2 777 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 NEDD4P46934 1319 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
RN7SKP172-201ENST00000411341 MKI67P46013 3256 aaKnown RBP11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 NFIBO00712 420 aa11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 NKRFO15226 690 aaKnown RBP eCLIP11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 MYL3P08590 195 aa11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 SUPT20HL2P0C7V6 817 aa11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 SMAD3P84022 425 aaKnown RBP11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 ITGA7Q13683 1181 aa11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 PPP2R5BQ15173 497 aa11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
RN7SKP172-201ENST00000411341 CCSAPQ6IQ19 270 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms