RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 C2orf71A6NGG8 1288 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 FAM170BA6NMN3 283 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 FAM155AB1AL88 458 aaPredicted RBP5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 B4E1Z4 1266 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 STXBP3O00186 592 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 APPP05067 770 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 THBDP07204 575 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 CD3EP07766 207 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 PDGFRBP09619 1106 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 FLT3P36888 993 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 NFKB2Q00653 900 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 PRSS53Q2L4Q9 553 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 DPY19L1Q2PZI1 675 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 DUSP27Q5VZP5 1158 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 EEF1DP3Q658K8 133 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 E4F1Q66K89 784 aaPredicted RBP5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 DENND5AQ6IQ26 1287 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 RCSD1Q6JBY9 416 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 CNNM4Q6P4Q7 775 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 USP53Q70EK8 1073 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 FGD2Q7Z6J4 655 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 TSPYL5Q86VY4 417 aaPredicted RBP5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 FRS2Q8WU20 508 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 TP53INP1Q96A56 240 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 TCTN2Q96GX1 697 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 SCLYQ96I15 445 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 MAGEB10Q96LZ2 347 aaPredicted RBP5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 HOMER2Q9NSB8 354 aa5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 TNPO3Q9Y5L0 923 aaKnown RBP5.65□□□□□ -1.5
RNU2-28P-201ENST00000410457 TCRBV16S1A1N1A0A5B0 115 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 ALG1L2C9J202 215 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 MEIS1O00470 390 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 OPA1O60313 960 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 ZNF205O95201 554 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 F13BP05160 661 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 VAV1P15498 845 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 CPEP16870 476 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 ENDOUP21128 410 aaKnown RBP5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 GATA4P43694 442 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 CLCN7P51798 805 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 OXCT1P55809 520 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 DHCR24Q15392 516 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 NKPD1Q17RQ9 610 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 DDX46Q7L014 1031 aaKnown RBP5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 THAP5Q7Z6K1 395 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 ANKLE2Q86XL3 938 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 DDX42Q86XP3 938 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 JAMLQ86YT9 394 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 PPIL6Q8IXY8 311 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 LINC00116Q8NCU8 138 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 MFSD14AQ96MC6 490 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 FCRL3Q96P31 734 aaPredicted RBP5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 DBNDD2Q9BQY9 259 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 SLC12A9Q9BXP2 914 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 FAM126AQ9BYI3 521 aaPredicted RBP5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 GPR27Q9NS67 375 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 KLHL42Q9P2K6 505 aa5.64□□□□□ -1.51
RNU2-28P-201ENST00000410457 TRBV23OR9-2A0A075B6M9 112 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 GSC2O15499 205 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 MEFVO15553 781 aaPredicted RBP5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 CRTAMO95727 393 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 IFNGR1P15260 489 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 LTBRP36941 435 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 SEPHS1P49903 392 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 PCBP3P57721 371 aaKnown RBP5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 GPR85P60893 370 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 EXOSC10Q01780 885 aaKnown RBP5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 NFIAQ12857 509 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 KCNAB2Q13303 367 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 GAB4Q2WGN9 574 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 IQCEQ6IPM2 695 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 FERMT3Q86UX7 667 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 KSR1Q8IVT5 923 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 SPACA3Q8IXA5 215 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 FBXL6Q8N531 539 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 UBR7Q8N806 425 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 ORAI3Q9BRQ5 295 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 ASXL2Q76L83 1435 aa5.63□□□□□ -1.51
RNU2-28P-201ENST00000410457 RBAK-RBAKDNI3L0D1 243 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 MARCH6O60337 910 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 RASGRP1O95267 797 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 EYA4O95677 639 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 S100BP04271 92 aaPredicted RBP5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 CEACAM5P06731 702 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 RBM10P98175 930 aaKnown RBP5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 ZNF460Q14592 562 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 PKN3Q6P5Z2 889 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 RNF111Q6ZNA4 994 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 ARHGAP27Q6ZUM4 889 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 IFNL3Q8IZI9 196 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 SHISA5Q8N114 240 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 USHBP1Q8N6Y0 703 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 PHF20Q9BVI0 1012 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
RNU2-28P-201ENST00000410457 GPRC5CQ9NQ84 441 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms