RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 DGKHQ86XP1 1220 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 GSDMAQ96QA5 445 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 ZNF577Q9BSK1 485 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 UNC13BO14795 1591 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CRB1P82279 1406 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 PRPF3O43395 683 aaKnown RBP10.01□□□□□ -0.81
PBRM1-208ENST00000410007 SPATA1Q5VX52 437 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CROCCP2Q86T23 111 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CLIC6Q96NY7 704 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 SMC6Q96SB8 1091 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 RIOK1Q9BRS2 568 aaKnown RBP10.01□□□□□ -0.81
PBRM1-208ENST00000410007 NKIRAS1Q9NYS0 192 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 FEZ2Q9UHY8 353 aaPredicted RBP10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CLIC4Q9Y696 253 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 TMEM191BP0C7N4 346 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 LRMPQ12912 555 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 ADAM9Q13443 819 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 RASA3Q14644 834 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 ODR4Q5SWX8 454 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 TYW1BQ6NUM6 668 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 IFT20Q8IY31 132 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
PBRM1-208ENST00000410007 PIGSQ96S52 555 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 KCNK9Q9NPC2 374 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 ZSWIM5Q9P217 1185 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 C21orf2O43822 256 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 ASNSP08243 561 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 GAP43P17677 238 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CALRP27797 417 aaKnown RBP10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CDK8P49336 464 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 SIRT2Q8IXJ6 389 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
PBRM1-208ENST00000410007 JCADQ9P266 1359 aa10.01□□□□□ -0.81
PBRM1-208ENST00000410007 CFAP221Q4G0U5 840 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 TMEM179Q6ZVK1 233 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 RNF169Q8NCN4 708 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
PBRM1-208ENST00000410007 STRBPQ96SI9 672 aaKnown RBP10□□□□□ -0.81
PBRM1-208ENST00000410007 SLC39A2Q9NP94 309 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 ASIC3Q9UHC3 531 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 MINPP1Q9UNW1 487 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 MCAMP43121 646 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 NDUFA8P51970 172 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 PI4K2BQ8TCG2 481 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 TBCKQ8TEA7 893 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 CEP63Q96MT8 703 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 GNL3Q9BVP2 549 aaKnown RBP eCLIP10□□□□□ -0.81
PBRM1-208ENST00000410007 NBPF3Q9H094 633 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 AP5M1Q9H0R1 490 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 XPOTO43592 962 aaKnown RBP10□□□□□ -0.81
PBRM1-208ENST00000410007 MMP1P03956 469 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 SLC16A2P36021 539 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 RSPH3Q86UC2 560 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 DYNLL2Q96FJ2 89 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 ST7Q9NRC1 585 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 MYO1AQ9UBC5 1043 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 HESX1Q9UBX0 185 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 ABCD1P33897 745 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 KIF23Q02241 960 aaPredicted RBP10□□□□□ -0.81
PBRM1-208ENST00000410007 CPLX4Q7Z7G2 160 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 U2AF1L4Q8WU68 220 aaKnown RBP10□□□□□ -0.81
PBRM1-208ENST00000410007 TIGD1Q96MW7 591 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 NACC1Q96RE7 527 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 STK17AQ9UEE5 414 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 CD2APQ9Y5K6 639 aa10□□□□□ -0.81
PBRM1-208ENST00000410007 ABCC12Q96J65 1359 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 MYL1P05976 194 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 RNASE9P60153 205 aaKnown RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 CUL4AQ13619 759 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 PPP1R21Q6ZMI0 780 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 ISCA1Q9BUE6 129 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 TRIM7Q9C029 511 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 AMFRQ9UKV5 643 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 SORBS3O60504 671 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 CCND2P30279 289 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 HOXA7P31268 230 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 ZNF827Q17R98 1081 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 MIS18BP1Q6P0N0 1132 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 DAAM2Q86T65 1068 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 POMGNT1Q8WZA1 660 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 FAM193BQ96PV7 902 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 ATP2C2O75185 946 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 USP17L2Q6R6M4 530 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 FAM76AQ8TAV0 307 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 RASGRP4Q8TDF6 673 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 CD209Q9NNX6 404 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 SEPT9Q9UHD8 586 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 HNRNPDLO14979 420 aaKnown RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 POLR2BP30876 1174 aaKnown RBP9.99□□□□□ -0.81
PBRM1-208ENST00000410007 NECTIN1Q15223 517 aa9.99□□□□□ -0.81
PBRM1-208ENST00000410007 UAP1Q16222 522 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms