RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SVILO95425 2214 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 NBASA2RRP1 2371 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SALL1Q9NSC2 1324 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 hCG_1642624A0A1W2PR95 340 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SLURP2P0DP57 97 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CETPP11597 493 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 FKBP1AP62942 108 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 ACTN3Q08043 901 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 DPP8Q6V1X1 898 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RASGRP2Q7LDG7 609 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 TEX2Q8IWB9 1127 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SMCR8Q8TEV9 937 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 MS4A4AQ96JQ5 239 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 FBXL18Q96ME1 805 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 ABCB6Q9NP58 842 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 PUF60Q9UHX1 559 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SAMM50Q9Y512 469 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 COL4A3Q01955 1670 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 TAF5LO75529 589 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 MARCKSP29966 332 aaPredicted RBP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 TDO2P48775 406 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 GABPB1Q06547 395 aaPredicted RBP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 NBPF20Q3BBV1 942 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 PARP10Q53GL7 1025 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 ZNF530Q6P9A1 599 aaPredicted RBP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 RAET1EQ8TD07 263 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 MYL10Q9BUA6 226 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 HDAC5Q9UQL6 1122 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 PCDHA5Q9Y5H7 936 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 TTC3P53804 2025 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 TP53BP1Q12888 1972 aaPredicted RBP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 PLEKP08567 350 aaPredicted RBP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 APOBRQ0VD83 1088 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 ANGEL2Q5VTE6 544 aaKnown RBP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 CCDC191Q8NCU4 936 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 L3MBTL1Q9Y468 752 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.59□□□□□ -1.83
RGPD3-202ENST00000409886 KNTC1P50748 2209 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 CACNA1BQ00975 2339 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 NUP205Q92621 2012 aa3.59□□□□□ -1.83
RGPD3-202ENST00000409886 SURF6O75683 361 aaKnown RBP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 ABL2P42684 1182 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 TOB1P50616 345 aaPredicted RBP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 RBM5P52756 815 aaKnown RBP eCLIP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 TAF7Q15545 349 aaPredicted RBP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 DZIP3Q86Y13 1208 aaKnown RBP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 ANKRD13AQ8IZ07 590 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 GPATCH11Q8N954 259 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 NSUN7Q8NE18 718 aaKnown RBP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 ACRBPQ8NEB7 543 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 CCDC112Q8NEF3 446 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 SH3TC2Q8TF17 1288 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 PSMB7Q99436 277 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 EPHX3Q9H6B9 360 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 MYOZ2Q9NPC6 264 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 GBF1Q92538 1859 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 NIPBLQ6KC79 2804 aaeCLIP3.59□□□□□ -1.84
RGPD3-202ENST00000409886 ESYT3A0FGR9 886 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 FRMD3A2A2Y4 597 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 CREB1P16220 341 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 OSBPP22059 807 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 DSG3P32926 999 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 ERVK-24P63145 666 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 AMPD2Q01433 879 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 RAB30Q15771 203 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 QPCTQ16769 361 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 SUPT20HL1Q3ZLR7 823 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 NCAPGQ9BPX3 1015 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 RNF208Q9H0X6 261 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 ARHGEF10LQ9HCE6 1279 aa3.59□□□□□ -1.84
RGPD3-202ENST00000409886 MYH9P35579 1960 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MYH11P35749 1972 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 DOCK1Q14185 1865 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SMAPO00193 183 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 RNMTO43148 476 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 CT47B1P0C2W7 299 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 FAM153BP0C7A2 387 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 GM2AP17900 193 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MCCP23508 829 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 CASQ1P31415 396 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 CCNHP51946 323 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 EVCP57679 992 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 ANTXR2P58335 489 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 USP4Q13107 963 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SNX17Q15036 470 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 ALDH1L2Q3SY69 923 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 FAM153CQ494X1 144 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 TBC1D10BQ4KMP7 808 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 ZC3H12AQ5D1E8 599 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MUM1L1Q5H9M0 696 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 MCTP2Q6DN12 878 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 EGFL6Q8IUX8 553 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 SPNS2Q8IVW8 549 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 GLIS3Q8NEA6 775 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 FAM153AQ9UHL3 310 aa3.58□□□□□ -1.84
RGPD3-202ENST00000409886 HEATR1Q9H583 2144 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 PMS1P54277 932 aaKnown RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 TAF1CQ15572 869 aaPredicted RBP3.58□□□□□ -1.84
RGPD3-202ENST00000409886 WDR59Q6PJI9 974 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms